Add infectious disease publications to inspirations and grants table to research projects #1129
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| name: Render and Publish | |
| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| workflow_dispatch: | |
| # Required permissions for GitHub Pages deployment | |
| permissions: | |
| contents: read | |
| pages: write | |
| id-token: write | |
| # Prevent concurrent deployments | |
| concurrency: | |
| group: "pages" | |
| cancel-in-progress: false | |
| jobs: | |
| # Build job - renders Quarto project | |
| build: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 15 | |
| permissions: | |
| contents: read | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| cache: 'pip' | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| - name: Set up Quarto | |
| uses: quarto-dev/quarto-actions/setup@v2 | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Render Quarto Project | |
| uses: quarto-dev/quarto-actions/render@v2 | |
| # Upload PR preview artifact | |
| - name: Upload PR preview artifact | |
| if: github.event_name == 'pull_request' | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: pr-preview-${{ github.event.pull_request.number }} | |
| path: _site | |
| retention-days: 7 | |
| compression-level: 6 | |
| # Configure and upload for GitHub Pages (main branch only) | |
| - name: Setup Pages | |
| if: github.ref == 'refs/heads/main' | |
| uses: actions/configure-pages@v5 | |
| - name: Upload Pages artifact | |
| if: github.ref == 'refs/heads/main' | |
| uses: actions/upload-pages-artifact@v3 | |
| with: | |
| path: _site | |
| # Create comprehensive build summary | |
| - name: Create build summary | |
| if: always() | |
| run: | | |
| echo "## 📊 Quarto Build Summary" >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| echo "| Property | Value |" >> $GITHUB_STEP_SUMMARY | |
| echo "|----------|-------|" >> $GITHUB_STEP_SUMMARY | |
| echo "| Event | ${{ github.event_name }} |" >> $GITHUB_STEP_SUMMARY | |
| echo "| Branch | ${{ github.ref_name }} |" >> $GITHUB_STEP_SUMMARY | |
| echo "| Commit | \`${{ github.sha }}\` |" >> $GITHUB_STEP_SUMMARY | |
| echo "| Workflow | [${{ github.workflow }}](${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }}) |" >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| if [ "${{ github.event_name }}" = "pull_request" ]; then | |
| echo "### ✅ PR Preview" >> $GITHUB_STEP_SUMMARY | |
| echo "Site rendered successfully for PR #${{ github.event.pull_request.number }}" >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| echo "Download the artifact from the [Actions tab](${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }}) to preview the changes." >> $GITHUB_STEP_SUMMARY | |
| elif [ "${{ github.ref }}" = "refs/heads/main" ]; then | |
| echo "### ✅ Production Build" >> $GITHUB_STEP_SUMMARY | |
| echo "Site rendered successfully and ready for deployment to GitHub Pages." >> $GITHUB_STEP_SUMMARY | |
| else | |
| echo "### ✅ Build Complete" >> $GITHUB_STEP_SUMMARY | |
| echo "Site rendered successfully." >> $GITHUB_STEP_SUMMARY | |
| fi | |
| # Deploy job - deploys to GitHub Pages (main branch only) | |
| deploy: | |
| if: github.ref == 'refs/heads/main' | |
| environment: | |
| name: github-pages | |
| url: ${{ steps.deployment.outputs.page_url }} | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 10 | |
| needs: build | |
| permissions: | |
| pages: write | |
| id-token: write | |
| steps: | |
| - name: Deploy to GitHub Pages | |
| id: deployment | |
| uses: actions/deploy-pages@v4 | |
| - name: Create deployment summary | |
| if: success() | |
| run: | | |
| echo "## 🚀 Deployment Complete" >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| echo "The site has been successfully deployed to GitHub Pages." >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| echo "🔗 **Site URL:** ${{ steps.deployment.outputs.page_url }}" >> $GITHUB_STEP_SUMMARY |