Skip to content

Commit 8744f8f

Browse files
hoganwrhoganwr
committed
updated import files from latest build
1 parent af34f02 commit 8744f8f

File tree

12 files changed

+2206
-100950
lines changed

12 files changed

+2206
-100950
lines changed

‎src/ontology/imports/apollo_sv_import.owl‎

Lines changed: 62 additions & 50 deletions
Original file line numberDiff line numberDiff line change
@@ -1,79 +1,91 @@
11
Prefix(:=<http://purl.obolibrary.org/obo/dron/imports/apollo_sv_import.owl#>)
2+
Prefix(dc:=<http://purl.org/dc/elements/1.1/>)
3+
Prefix(go:=<http://purl.obolibrary.org/obo/go#>)
4+
Prefix(uo:=<http://purl.obolibrary.org/obo/uo#>)
5+
Prefix(obo:=<http://purl.obolibrary.org/obo/>)
26
Prefix(owl:=<http://www.w3.org/2002/07/owl#>)
37
Prefix(rdf:=<http://www.w3.org/1999/02/22-rdf-syntax-ns#>)
8+
Prefix(www:=<http://www.referent-tracking.com/>)
49
Prefix(xml:=<http://www.w3.org/XML/1998/namespace>)
510
Prefix(xsd:=<http://www.w3.org/2001/XMLSchema#>)
11+
Prefix(core:=<http://purl.obolibrary.org/obo/uberon/core#>)
12+
Prefix(doap:=<http://usefulinc.com/ns/doap#>)
13+
Prefix(foaf:=<http://xmlns.com/foaf/0.1/>)
14+
Prefix(pato:=<http://purl.obolibrary.org/obo/pato#>)
615
Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
16+
Prefix(skos:=<http://www.w3.org/2004/02/skos/core#>)
17+
Prefix(swrl:=<http://www.w3.org/2003/11/swrl#>)
18+
Prefix(swrla:=<http://swrl.stanford.edu/ontologies/3.3/swrla.owl#>)
19+
Prefix(swrlb:=<http://www.w3.org/2003/11/swrlb#>)
20+
Prefix(terms:=<http://purl.org/dc/terms/>)
21+
Prefix(protege:=<http://protege.stanford.edu/plugins/owl/protege#>)
22+
Prefix(subsets:=<http://purl.obolibrary.org/obo/ro/subsets#>)
23+
Prefix(oboInOwl:=<http://www.geneontology.org/formats/oboInOwl#>)
24+
Prefix(apollo_sv:=<http://purl.obolibrary.org/obo/apollo_sv.owl/>)
25+
Prefix(ncbitaxon:=<http://purl.obolibrary.org/obo/ncbitaxon#>)
26+
Prefix(ace_lexicon:=<http://attempto.ifi.uzh.ch/ace_lexicon#>)
727

828

929
Ontology(<http://purl.obolibrary.org/obo/dron/imports/apollo_sv_import.owl>
10-
<http://purl.obolibrary.org/obo/dron/releases/2025-11-11/imports/apollo_sv_import.owl>
11-
Annotation(<http://purl.org/dc/elements/1.1/source> <http://purl.obolibrary.org/obo/apollo_sv/releases/2024-12-24/apollo_sv.owl>)
30+
<http://purl.obolibrary.org/obo/dron/releases/2025-12-19/imports/apollo_sv_import.owl>
31+
Annotation(dc:source <http://purl.obolibrary.org/obo/apollo_sv/releases/2024-12-24/apollo_sv.owl>)
1232
Annotation(rdfs:comment "This version of DrOn is current through RxNorm version 20AA_251006F")
13-
Annotation(owl:versionInfo "2025-11-11")
33+
Annotation(owl:versionInfo "2025-12-19")
1434

15-
Declaration(Class(<http://purl.obolibrary.org/obo/APOLLO_SV_00000145>))
16-
Declaration(Class(<http://purl.obolibrary.org/obo/APOLLO_SV_00000335>))
17-
Declaration(Class(<http://purl.obolibrary.org/obo/APOLLO_SV_00000336>))
18-
Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000016>))
19-
Declaration(AnnotationProperty(<http://purl.obolibrary.org/obo/IAO_0000111>))
20-
Declaration(AnnotationProperty(<http://purl.obolibrary.org/obo/IAO_0000115>))
21-
Declaration(AnnotationProperty(<http://purl.obolibrary.org/obo/IAO_0000117>))
22-
Declaration(AnnotationProperty(<http://purl.obolibrary.org/obo/IAO_0000118>))
23-
Declaration(AnnotationProperty(<http://purl.obolibrary.org/obo/IAO_0000232>))
24-
Declaration(AnnotationProperty(<http://purl.obolibrary.org/obo/IAO_0000600>))
25-
Declaration(AnnotationProperty(<http://purl.org/dc/elements/1.1/contributor>))
26-
Declaration(AnnotationProperty(<http://purl.org/dc/elements/1.1/creator>))
27-
Declaration(AnnotationProperty(<http://purl.org/dc/elements/1.1/source>))
28-
Declaration(AnnotationProperty(<http://purl.org/dc/terms/contributor>))
29-
Declaration(AnnotationProperty(<http://purl.org/dc/terms/description>))
30-
Declaration(AnnotationProperty(<http://purl.org/dc/terms/license>))
31-
Declaration(AnnotationProperty(<http://purl.org/dc/terms/title>))
32-
Declaration(AnnotationProperty(<http://www.referent-tracking.com/RTS_00000001>))
33-
Declaration(AnnotationProperty(<http://www.referent-tracking.com/RTS_00000002>))
35+
Declaration(Class(obo:APOLLO_SV_00000145))
36+
Declaration(Class(obo:APOLLO_SV_00000335))
37+
Declaration(Class(obo:APOLLO_SV_00000336))
38+
Declaration(Class(obo:BFO_0000016))
39+
Declaration(AnnotationProperty(obo:IAO_0000111))
40+
Declaration(AnnotationProperty(obo:IAO_0000115))
41+
Declaration(AnnotationProperty(obo:IAO_0000117))
42+
Declaration(AnnotationProperty(obo:IAO_0000118))
43+
Declaration(AnnotationProperty(obo:IAO_0000232))
44+
Declaration(AnnotationProperty(obo:IAO_0000600))
45+
Declaration(AnnotationProperty(dc:source))
3446

3547

3648
############################
3749
# Classes
3850
############################
3951

40-
# Class: <http://purl.obolibrary.org/obo/APOLLO_SV_00000145> (resistance to infection)
52+
# Class: obo:APOLLO_SV_00000145 (resistance to infection)
4153

42-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/APOLLO_SV_00000145> "The dispostion of an organism of a particular biological taxon A that is realized by inhibiting the establishment of an infection by an organism of another particular biological taxon that bears an infectious disposition towards members of A"@en)
43-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000117> <http://purl.obolibrary.org/obo/APOLLO_SV_00000145> "Mathias Brochhausen"@de)
44-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000117> <http://purl.obolibrary.org/obo/APOLLO_SV_00000145> "William R. Hogan"@en)
45-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000232> <http://purl.obolibrary.org/obo/APOLLO_SV_00000145> "Key issue with equivalent class axiom is how to say that this scattered molecular aggregate is both 1) not originally part of the organism and/or 2) is temporary.
54+
AnnotationAssertion(obo:IAO_0000115 obo:APOLLO_SV_00000145 "The dispostion of an organism of a particular biological taxon A that is realized by inhibiting the establishment of an infection by an organism of another particular biological taxon that bears an infectious disposition towards members of A"@en)
55+
AnnotationAssertion(obo:IAO_0000117 obo:APOLLO_SV_00000145 "Mathias Brochhausen"@de)
56+
AnnotationAssertion(obo:IAO_0000117 obo:APOLLO_SV_00000145 "William R. Hogan"@en)
57+
AnnotationAssertion(obo:IAO_0000232 obo:APOLLO_SV_00000145 "Key issue with equivalent class axiom is how to say that this scattered molecular aggregate is both 1) not originally part of the organism and/or 2) is temporary.
4658

4759
I suppose baby could be born with drug acquired from its mother's system.
4860

4961
Somehow, it's not innate and it's temporary, ie, the body will eventually clear it."@en)
50-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000600> <http://purl.obolibrary.org/obo/APOLLO_SV_00000145> "The dispostion of an organism of a particular biological taxon A that is realized by inhibiting the establishment of an infection by an organism of another particular biological taxon that bears an infectious disposition towards members of A"@en)
51-
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/APOLLO_SV_00000145> "resistance to infection"@en)
52-
SubClassOf(<http://purl.obolibrary.org/obo/APOLLO_SV_00000145> <http://purl.obolibrary.org/obo/BFO_0000016>)
62+
AnnotationAssertion(obo:IAO_0000600 obo:APOLLO_SV_00000145 "The dispostion of an organism of a particular biological taxon A that is realized by inhibiting the establishment of an infection by an organism of another particular biological taxon that bears an infectious disposition towards members of A"@en)
63+
AnnotationAssertion(rdfs:label obo:APOLLO_SV_00000145 "resistance to infection"@en)
64+
SubClassOf(obo:APOLLO_SV_00000145 obo:BFO_0000016)
5365

54-
# Class: <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> (chemical resistance to infection)
66+
# Class: obo:APOLLO_SV_00000335 (chemical resistance to infection)
5567

56-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000111> <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "chemical resistance to infection"@en)
57-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "A resistance to infection that is conferred by the presence, in sufficient quantity, of a particular molecular entity that is not normally present in the organism."@en)
58-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000117> <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "William R. Hogan"@en)
59-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000118> <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "chemoprotection"@en)
60-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000118> <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "chemoprotective resistance"@en)
61-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000118> <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "chemotherapeutic resistance to infection"@en)
62-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000600> <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "A resistance to infection that is conferred by the presence, in sufficient quantity, of a particular molecular entity that is not normally present in the organism."@en)
63-
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "As with all dispositions, chemical resistance need not be realized to exist. The presence of cholorquine confers this disposition even if the person is never bitten by a mosquito, let alone a malaria-laden mosquito."@en)
64-
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "Examples: chemoprophylaxis of malaria with chloroquine, treatment of infections with antibiotics, antiviral treatment"@en)
65-
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/APOLLO_SV_00000335> "chemical resistance to infection"@en)
68+
AnnotationAssertion(obo:IAO_0000111 obo:APOLLO_SV_00000335 "chemical resistance to infection"@en)
69+
AnnotationAssertion(obo:IAO_0000115 obo:APOLLO_SV_00000335 "A resistance to infection that is conferred by the presence, in sufficient quantity, of a particular molecular entity that is not normally present in the organism."@en)
70+
AnnotationAssertion(obo:IAO_0000117 obo:APOLLO_SV_00000335 "William R. Hogan"@en)
71+
AnnotationAssertion(obo:IAO_0000118 obo:APOLLO_SV_00000335 "chemoprotection"@en)
72+
AnnotationAssertion(obo:IAO_0000118 obo:APOLLO_SV_00000335 "chemoprotective resistance"@en)
73+
AnnotationAssertion(obo:IAO_0000118 obo:APOLLO_SV_00000335 "chemotherapeutic resistance to infection"@en)
74+
AnnotationAssertion(obo:IAO_0000600 obo:APOLLO_SV_00000335 "A resistance to infection that is conferred by the presence, in sufficient quantity, of a particular molecular entity that is not normally present in the organism."@en)
75+
AnnotationAssertion(rdfs:comment obo:APOLLO_SV_00000335 "As with all dispositions, chemical resistance need not be realized to exist. The presence of cholorquine confers this disposition even if the person is never bitten by a mosquito, let alone a malaria-laden mosquito."@en)
76+
AnnotationAssertion(rdfs:comment obo:APOLLO_SV_00000335 "Examples: chemoprophylaxis of malaria with chloroquine, treatment of infections with antibiotics, antiviral treatment"@en)
77+
AnnotationAssertion(rdfs:label obo:APOLLO_SV_00000335 "chemical resistance to infection"@en)
6678

67-
# Class: <http://purl.obolibrary.org/obo/APOLLO_SV_00000336> (resistance to malaria infection)
79+
# Class: obo:APOLLO_SV_00000336 (resistance to malaria infection)
6880

69-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000111> <http://purl.obolibrary.org/obo/APOLLO_SV_00000336> "resistance to malaria infection"@en)
70-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/APOLLO_SV_00000336> "A resistance to infection by P. vivax, P. ovale, P. malariae, and/or P. falciparum."@en)
71-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000117> <http://purl.obolibrary.org/obo/APOLLO_SV_00000336> "William R. Hogan"@en)
72-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000118> <http://purl.obolibrary.org/obo/APOLLO_SV_00000336> "malaria resistance"@en)
73-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000118> <http://purl.obolibrary.org/obo/APOLLO_SV_00000336> "resistance to malaria"@en)
74-
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000600> <http://purl.obolibrary.org/obo/APOLLO_SV_00000336> "A resistance to infection by P. vivax, P. ovale, P. malariae, and/or P. falciparum."@en)
75-
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/APOLLO_SV_00000336> "resistance to malaria infection"@en)
76-
SubClassOf(<http://purl.obolibrary.org/obo/APOLLO_SV_00000336> <http://purl.obolibrary.org/obo/APOLLO_SV_00000145>)
81+
AnnotationAssertion(obo:IAO_0000111 obo:APOLLO_SV_00000336 "resistance to malaria infection"@en)
82+
AnnotationAssertion(obo:IAO_0000115 obo:APOLLO_SV_00000336 "A resistance to infection by P. vivax, P. ovale, P. malariae, and/or P. falciparum."@en)
83+
AnnotationAssertion(obo:IAO_0000117 obo:APOLLO_SV_00000336 "William R. Hogan"@en)
84+
AnnotationAssertion(obo:IAO_0000118 obo:APOLLO_SV_00000336 "malaria resistance"@en)
85+
AnnotationAssertion(obo:IAO_0000118 obo:APOLLO_SV_00000336 "resistance to malaria"@en)
86+
AnnotationAssertion(obo:IAO_0000600 obo:APOLLO_SV_00000336 "A resistance to infection by P. vivax, P. ovale, P. malariae, and/or P. falciparum."@en)
87+
AnnotationAssertion(rdfs:label obo:APOLLO_SV_00000336 "resistance to malaria infection"@en)
88+
SubClassOf(obo:APOLLO_SV_00000336 obo:APOLLO_SV_00000145)
7789

7890

7991
)

0 commit comments

Comments
 (0)