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Add Build Pipeline
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‎.github/release/.gitkeep‎

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‎.github/workflows/build.yml‎

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name: Build
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on:
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push:
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tags: [ "v*.*.*" ]
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branches: [ "main", "build-pipeline" ]
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pull_request:
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branches: [ "main" ]
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merge_group:
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schedule:
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- cron: '45 1 * * *'
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# Declare default permissions as read-only.
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permissions: read-all
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concurrency:
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group: ${{ github.workflow }}-${{ github.event_name == 'pull_request' && github.ref || github.run_id }}
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cancel-in-progress: true
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env:
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BUILD_ID: build-${{ github.run_id }}
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REGISTRY: ghcr.io/${{ github.repository_owner }}/interpolar
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jobs:
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build-image:
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runs-on: ubuntu-24.04
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permissions:
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packages: write
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strategy:
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matrix:
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image: [ r-env ]
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include:
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- image: r-env
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context: .
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file: Dockerfile_R
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steps:
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- name: Harden Runner
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uses: step-security/harden-runner@f4a75cfd619ee5ce8d5b864b0d183aff3c69b55a # v2.13.1
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with:
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egress-policy: audit
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- name: Checkout
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uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
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- name: Login to GHCR
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uses: docker/login-action@184bdaa0721073962dff0199f1fb9940f07167d1 # v3.5.0
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with:
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registry: ghcr.io
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username: ${{ github.repository_owner }}
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password: ${{ secrets.GITHUB_TOKEN }}
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- name: Collect Info
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id: info
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run: |
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date="$(git log -1 --date="iso-strict-local" --format="%cd")"
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echo "commit_date=${date}" >>"${GITHUB_OUTPUT}"
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- name: Generate Container Image Metadata
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id: meta
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uses: docker/metadata-action@c1e51972afc2121e065aed6d45c65596fe445f3f # v5.8.0
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with:
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images: ${{ env.REGISTRY }}/${{ matrix.image }}
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labels: |
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org.opencontainers.image.created=${{ steps.info.outputs.commit_date }}
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annotations: |
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org.opencontainers.image.created=${{ steps.info.outputs.commit_date }}
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- name: Build and Push Container Image
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id: push
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uses: docker/build-push-action@263435318d21b8e681c14492fe198d362a7d2c83 # v6.18.0
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with:
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context: ${{ matrix.context }}
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file: ${{ matrix.file }}
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platforms: linux/amd64
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push: true
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tags: ${{ env.REGISTRY }}/${{ matrix.image }}:${{ env.BUILD_ID }}
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labels: ${{ steps.meta.outputs.labels }}
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annotations: ${{ steps.meta.outputs.annotations }}
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- name: Output Image Digest
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id: digest
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run: echo "${{ matrix.image }}-digest=${{ steps.push.outputs.digest }}" >>"${GITHUB_OUTPUT}"
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outputs:
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r-env-digest: ${{ steps.digest.outputs.r-env-digest }}
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scan-image:
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needs: [ build-image ]
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runs-on: ubuntu-24.04
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strategy:
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matrix:
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image: [ r-env ]
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permissions:
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security-events: write
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steps:
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- name: Harden Runner
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uses: step-security/harden-runner@f4a75cfd619ee5ce8d5b864b0d183aff3c69b55a # v2.13.1
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with:
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egress-policy: audit
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- name: Run Trivy Vulnerability Scanner
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uses: aquasecurity/trivy-action@76071ef0d7ec797419534a183b498b4d6366cf37 # 0.31.0
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with:
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image-ref: ${{ env.REGISTRY }}/${{ matrix.image }}:${{ env.BUILD_ID }}
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format: sarif
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output: trivy-results.sarif
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severity: 'CRITICAL,HIGH'
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timeout: '15m0s'
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- name: Upload Trivy Scan Results to GitHub Security Tab
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uses: github/codeql-action/upload-sarif@192325c86100d080feab897ff886c34abd4c83a3 # v3.30.3
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with:
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sarif_file: trivy-results.sarif
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- name: Generate SBOM
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uses: aquasecurity/trivy-action@76071ef0d7ec797419534a183b498b4d6366cf37 # 0.31.0
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with:
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image-ref: ${{ env.REGISTRY }}/${{ matrix.image }}:${{ env.BUILD_ID }}
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format: cyclonedx
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output: sbom-trivy.json
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scan-type: image
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- name: Upload Trivy SBOM
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uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4.6.2
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with:
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name: ${{ matrix.image }}-sbom-trivy
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path: sbom-trivy.json
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if-no-files-found: error
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retention-days: 7
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tag-image:
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if: github.event_name != 'pull_request' || !github.event.pull_request.head.repo.fork
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# `test` must succeed before finally tagging (i.e., publishing) the image
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needs: [ build-image, scan-image ]
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runs-on: ubuntu-24.04
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permissions:
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packages: write
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strategy:
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matrix:
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image: [ r-env ]
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env:
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DIGEST: ${{ needs.build-image.outputs[format('{0}-digest', matrix.image )]}}
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steps:
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- name: Harden Runner
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uses: step-security/harden-runner@f4a75cfd619ee5ce8d5b864b0d183aff3c69b55a # v2.13.1
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with:
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egress-policy: audit
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- name: Install SLSA Verifier
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uses: slsa-framework/slsa-verifier/actions/installer@ea584f4502babc6f60d9bc799dbbb13c1caa9ee6 # v2.7.1
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- name: Install crane
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uses: iarekylew00t/crane-installer@af22986e01a08365e8b29e45e5a336c7995c111b # v4.0.0
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- name: Login to GHCR
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uses: docker/login-action@184bdaa0721073962dff0199f1fb9940f07167d1 # v3.5.0
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with:
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registry: ghcr.io
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username: ${{ github.repository_owner }}
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password: ${{ secrets.GITHUB_TOKEN }}
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- name: Generate Container Image Metadata
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id: meta
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uses: docker/metadata-action@c1e51972afc2121e065aed6d45c65596fe445f3f # v5.8.0
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with:
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images: ghcr.io/${{ github.repository_owner }}/interpolar/${{ matrix.image }}
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tags: |
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type=schedule
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type=ref,event=branch
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type=ref,event=pr
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type=semver,pattern={{version}}
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type=semver,pattern={{major}}.{{minor}}
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type=raw,value=latest,enable={{is_default_branch}}
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- name: Retag and Push Container Image
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run: |
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while read -r tag; do
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echo "${tag}" | cut -d: -f2 | xargs crane tag "${REGISTRY}/${{ matrix.image }}@${DIGEST}"
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done <<<"${{ steps.meta.outputs.tags }}"
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sign-image:
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needs: [ build-image, scan-image ]
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runs-on: ubuntu-24.04
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permissions:
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packages: write
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id-token: write
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strategy:
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matrix:
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image: [ r-env ]
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env:
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DIGEST: ${{ needs.build-image.outputs[format('{0}-digest', matrix.image )]}}
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steps:
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- name: Harden Runner
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uses: step-security/harden-runner@f4a75cfd619ee5ce8d5b864b0d183aff3c69b55a # v2.13.1
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with:
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egress-policy: audit
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- name: Install cosign
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uses: sigstore/cosign-installer@d7543c93d881b35a8faa02e8e3605f69b7a1ce62 # v3.10.0
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- name: Download SBOM
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uses: actions/download-artifact@634f93cb2916e3fdff6788551b99b062d0335ce0 # v5.0.0
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with:
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name: ${{ matrix.image }}-sbom-trivy
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path: .
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- name: Login to GHCR
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uses: docker/login-action@184bdaa0721073962dff0199f1fb9940f07167d1 # v3.5.0
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with:
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registry: ghcr.io
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username: ${{ github.repository_owner }}
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password: ${{ secrets.GITHUB_TOKEN }}
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- name: Sign Image
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env:
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IMAGE_REF: ${{ env.REGISTRY }}/${{ matrix.image }}@${{ env.DIGEST }}
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run: cosign sign --yes "${IMAGE_REF}"
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- name: Attest Image SBOM
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env:
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IMAGE_REF: ${{ env.REGISTRY }}/${{ matrix.image }}@${{ env.DIGEST }}
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run: cosign attest --yes --predicate "sbom-trivy.json" --type cyclonedx "${IMAGE_REF}"
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attest-image:
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needs: [ build-image ]
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permissions:
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actions: read # for detecting the Github Actions environment.
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id-token: write
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packages: write # for uploading attestations.
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uses: slsa-framework/slsa-github-generator/.github/workflows/generator_container_slsa3.yml@v2.1.0
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with:
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image: ghcr.io/${{ github.repository_owner }}/interpolar/${{ matrix.image }}
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digest: ${{ needs.build-image.outputs[format('{0}-digest', matrix.image)] }}
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registry-username: ${{ github.repository_owner }}
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secrets:
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registry-password: ${{ secrets.GITHUB_TOKEN }}
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strategy:
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matrix:
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image: [ r-env ]
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create-release:
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runs-on: ubuntu-24.04
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steps:
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- name: Harden Runner
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uses: step-security/harden-runner@f4a75cfd619ee5ce8d5b864b0d183aff3c69b55a # v2.13.1
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with:
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egress-policy: audit
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- name: Checkout
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uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
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- name: Insert Version
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env:
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COMMIT_TAG: ${{ github.ref_type == 'tag' && github.ref_name || '' }}
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REF_NAME: ${{ github.event_name == 'pull_request' && format('pr-{}', github.event.number) || github.ref_name }}
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run: |
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raw_tag="${COMMIT_TAG#v}"
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image_tag="${raw_tag:-${REF_NAME}}"
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echo "INTERPOLAR_VERSION=${tag}" >VERSION.env
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sed -i -E 's|(ghcr\.io/${{ github.repository_owner }}/interpolar/[[:alnum:]_.-]+):latest|\1:'"${image_tag}"'|g' docker-compose.yml
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- name: Create Release Archives
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id: create
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run: |
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zip -r ".github/release/interpolar-${GITHUB_REF_NAME}.zip" -x@.releaseignore .
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sha256sum "interpolar-${GITHUB_REF_NAME}.zip" >"interpolar-${GITHUB_REF_NAME}.zip.sha256"
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tar -czf ".github/release/interpolar-${GITHUB_REF_NAME}.tar.gz" --exclude-from=.releaseignore .
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sha256sum "interpolar-${GITHUB_REF_NAME}.tar.gz" >"interpolar-${GITHUB_REF_NAME}.tar.gz.sha256"
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- name: Collect Checksums
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id: checksums
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working-directory: .github/release
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run: |
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# shellcheck disable=SC2016
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checksums="$(cat ./interpolar-*.sha256 | xargs -L1 bash -c 'echo -n "{\"$(echo $1 | cut -d. -f1)\": \"$(echo "$0 $1" | base64 -w0)\"}"' | jq -sc 'add')"
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echo "checksums-b64=${checksums}" >>"${GITHUB_OUTPUT}"
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files="$(find . -name "*.sha256" -printf "%f\n" | cut -d. -f1 | jq -R | jq -sc)"
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echo "files=${files}" >>"${GITHUB_OUTPUT}"
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- name: Upload Release Archives
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uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4.6.2
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with:
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name: release-archives
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path: |
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.github/release/*.zip
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.github/release/*.tar.gz
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.github/release/*.sha256
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if-no-files-found: error
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retention-days: 7
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outputs:
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checksums-b64: ${{ steps.checksums.outputs.checksums-b64 }}
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files: ${{ steps.checksums.outputs.files }}
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attest-release:
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needs: [ create-release ]
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permissions:
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actions: read
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contents: write
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id-token: write
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uses: slsa-framework/slsa-github-generator/.github/workflows/generator_generic_slsa3.yml@v2.1.0
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strategy:
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matrix:
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file: ${{ fromJson(needs.create-release.outputs.files) }}
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with:
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base64-subjects: ${{ fromJson(needs.create-release.outputs.checksums-b64)[matrix.file] }}
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upload-assets: false
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publish-release:
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needs: [ attest-release, tag-image ]
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runs-on: ubuntu-24.04
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if: github.ref_type == 'tag'
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permissions:
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contents: write
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steps:
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- name: Harden Runner
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uses: step-security/harden-runner@f4a75cfd619ee5ce8d5b864b0d183aff3c69b55a # v2.13.1
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with:
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egress-policy: audit
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- name: Recognize Prerelease
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id: prerelease
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# In SemVer 2.0, a prerelease version is always indicated by the presence of a hyphen
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run: |
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if [[ "${GITHUB_REF_NAME}" == *-* ]]; then
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echo "is-prerelease=true" >>"${GITHUB_OUTPUT}"
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fi
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- name: Download Release Archives
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uses: actions/download-artifact@634f93cb2916e3fdff6788551b99b062d0335ce0 # v5.0.0
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with:
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name: release-archives
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path: .
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- name: Download Provenance
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uses: actions/download-artifact@634f93cb2916e3fdff6788551b99b062d0335ce0 # v5.0.0
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with:
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pattern: "interpolar-*.intoto.jsonl"
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merge-multiple: true
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path: .
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- name: Release
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uses: softprops/action-gh-release@6cbd405e2c4e67a21c47fa9e383d020e4e28b836 # v2.3.3
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with:
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files: |
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interpolar-*.zip
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interpolar-*.tar.gz
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interpolar-*.sha256
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draft: true
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prerelease: ${{ steps.prerelease.outputs.is-prerelease }}

‎.releaseignore‎

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.git*
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.git/
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.github/
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.releaseignore
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renovate.json

‎docker-compose.yml‎

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# Handle the "deploy" section with care and configure it according to your setup and needs.
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# The "deploy" section should only be commented out if necessary.
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r-env:
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image: ghcr.io/medizininformatik-initiative/interpolar/r-env:latest
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build:
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context: ./
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dockerfile: Dockerfile_R

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