Analysis strategy for a mixed dataset (single and multi-chromosome bacteria) #52
Description
Hello,
I have a set of complete genome data for bacterial strains. My dataset is mixed: some strains have a single chromosome, while others have two.
Is it possible to analyze this mixed dataset together with this software, or is it better to separate the analyses (e.g., single-chromosome strains vs. multi-chromosome strains)? Do you have any advice on the best approach?
Thank you for your time and help.