Skip to content

Commit e1c1bda

Browse files
committed
Revert "fix dice score import"
This reverts commit 71f0539.
1 parent 4dde7ff commit e1c1bda

File tree

1 file changed

+2
-3
lines changed

1 file changed

+2
-3
lines changed

viscy/translation/evaluation.py

Lines changed: 2 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -3,8 +3,7 @@
33
import logging
44

55
from lightning.pytorch import LightningModule
6-
from torchmetrics.functional import accuracy, jaccard_index
7-
from torchmetrics.functional.segmentation import dice_score
6+
from torchmetrics.functional import accuracy, dice, jaccard_index
87

98
from viscy.data.typing import SegmentationSample
109
from viscy.translation.evaluation_metrics import mean_average_precision
@@ -37,7 +36,7 @@ def test_step(self, batch: SegmentationSample, batch_idx: int) -> None:
3736
"position": batch["position_idx"][0],
3837
"time": batch["time_idx"][0],
3938
"accuracy": (accuracy(pred_binary, target_binary, task="binary")),
40-
"dice": (dice_score(pred_binary, target_binary)),
39+
"dice": (dice(pred_binary, target_binary)),
4140
"jaccard": (jaccard_index(pred_binary, target_binary, task="binary")),
4241
"mAP": coco_metrics["map"],
4342
"mAP_50": coco_metrics["map_50"],

0 commit comments

Comments
 (0)