Bump virtualenv from 20.34.0 to 20.36.1 #81
Workflow file for this run
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: build | |
| permissions: | |
| contents: write | |
| pages: write | |
| id-token: write | |
| on: [push, workflow_dispatch] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.11"] | |
| steps: | |
| - name: Checkout the repo | |
| uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set up uv | |
| uses: astral-sh/setup-uv@v3 | |
| with: | |
| version: "latest" | |
| - name: Cache environment | |
| id: cached-dependencies | |
| uses: actions/cache@v4 | |
| env: | |
| CACHE_NUMBER: 0 # Increment this number if you wish to hard-refresh the cache. | |
| with: | |
| path: .venv | |
| key: ${{ runner.os }}-${{ hashFiles('**/uv.lock') }}-${{ env.CACHE_NUMBER }} | |
| - name: Install dependencies | |
| if: steps.cached-dependencies.outputs.cache-hit != 'true' | |
| shell: bash -l {0} | |
| run: | | |
| uv sync | |
| - name: Test with pytest | |
| shell: bash -l {0} | |
| run: | | |
| uv run pytest --cov=cellpack_analysis/ --cov-report html | |
| rm htmlcov/.gitignore | |
| - name: Publish coverage report | |
| if: ${{ github.ref == 'refs/heads/main' && matrix.python-version == '3.11' }} | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| branch: gh-pages | |
| folder: htmlcov | |
| target-folder: _coverage | |
| - name: Extract coverage percent | |
| if: ${{ github.ref == 'refs/heads/main' && matrix.python-version == '3.11' }} | |
| run: | | |
| echo "COVERAGE=$(grep -oP 'pc_cov">\K([0-9]+)' htmlcov/index.html)" >> $GITHUB_ENV | |
| - name: Generate coverage badge | |
| if: ${{ github.ref == 'refs/heads/main' && matrix.python-version == '3.11' }} | |
| uses: knightdave/anybadge-action@v1.1.0 | |
| with: | |
| file: docs/_badges/coverage.svg | |
| label: coverage | |
| value: ${{ env.COVERAGE }} | |
| value_format: "%d%%" | |
| anybadge_args: 50=red 60=orange 80=yellow 100=green | |
| template: docs/_badges/template.svg | |
| overwrite: true | |
| - name: Publish badge | |
| if: ${{ github.ref == 'refs/heads/main' && matrix.python-version == '3.11' }} | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| branch: gh-pages | |
| folder: docs/_badges | |
| target-folder: _badges | |
| clean: false | |
| result: | |
| if: ${{ always() && github.ref == 'refs/heads/main' }} | |
| runs-on: ubuntu-latest | |
| needs: [build] | |
| steps: | |
| - name: Checkout the repo | |
| uses: actions/checkout@v4 | |
| - name: Get build result | |
| run: | | |
| if [[ ${{ needs.build.result }} == "success" || ${{ needs.build.result }} == "skipped" ]]; then | |
| exit 0 | |
| else | |
| exit 1 | |
| fi | |
| - name: Generate passing badge | |
| if: success() | |
| uses: knightdave/anybadge-action@v1.1.0 | |
| with: | |
| file: docs/_badges/build.svg | |
| label: build | |
| value: passing | |
| color: green | |
| template: docs/_badges/template.svg | |
| overwrite: true | |
| - name: Generate failing badge | |
| if: failure() | |
| uses: knightdave/anybadge-action@v1.1.0 | |
| with: | |
| file: docs/_badges/build.svg | |
| label: build | |
| value: failing | |
| color: red | |
| template: docs/_badges/template.svg | |
| overwrite: true | |
| - name: Publish badge | |
| if: success() || failure() | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| branch: gh-pages | |
| folder: docs/_badges | |
| target-folder: _badges | |
| clean: false |