2025-10-30 WG meeting

[mogres]

Previous WG discussion: #418

Agenda

• cellPACK manuscript status updates
• cellPACK website status updates
• cellPACK core package status updates

Updates

Manuscript

• Figures 1-3 discussion earlier yesterday
• Discuss plans for figures 4-6
• Writing edits
• Go over data release check list (Connect with Clare)
• Update README cellpack-analysis#21

Website

• Update mapping from gradient strength input to decay_length recipe entry AllenCell/cellpack-client#99 open pr

Core package

• Use github CLI for PR comments and remove iterative/setup-cml action #422
• Revisit plotly analysis #404
• Fix and improve gradient validation #415
• Update documentation #300
  • On pause

Action Items

• @mogres, @jcass11, @gj210: writing edit pass, discussion for figures 4, 5, and 6
• Chat with @gj210 about where to release data (Quilt/S3 bucket directly, etc?)
• Connect with Clare re: licensing for code