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Fix python version
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.github/workflows/publish_meteor.yml

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@@ -58,15 +58,14 @@ jobs:
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- uses: conda-incubator/setup-miniconda@v3
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with:
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auto-update-conda: true
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python-version: "3.12"
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channels: conda-forge,bioconda
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- name: Build and upload the conda package
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shell: bash -el {0}
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run: |
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conda config --set anaconda_upload yes
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conda install -y anaconda-client
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conda install -y conda-build
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conda install -y conda-verify
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conda build --token ${{ secrets.ANACONDA_TOKEN }} conda_recipe
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conda install -y python=3.12 anaconda-client conda-build conda-verify
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conda build --token ${{ secrets.ANACONDA_TOKEN }} --python 3.12 conda_recipe
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pypi:
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if: ${{ !github.event.release.prerelease }}
@@ -75,6 +74,8 @@ jobs:
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- uses: actions/checkout@v4
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- name: Install Python
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uses: actions/setup-python@v4
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with:
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python-version: '3.12'
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# see details (matrix, python-version, python-version-file, etc.)
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# https://github.com/actions/setup-python
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- name: Install poetry

conda_recipe/meta.yaml

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@@ -23,11 +23,11 @@ build:
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requirements:
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host:
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- python >=3.11,<3.13
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- python 3.12.*
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- pip
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- poetry-core
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run:
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- python >=3.11,<3.13
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- python 3.12.*
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- bowtie2 >=2.3.5
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- pysam
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- pyarrow
@@ -47,7 +47,7 @@ test:
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- pysam
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- pandas
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- pyarrow
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- ete3
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- ete4
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- packaging
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- biom
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- cogent3

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