We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
1 parent 57d7f5f commit 186fbdcCopy full SHA for 186fbdc
pf2rnaseq/imports.py
@@ -134,12 +134,11 @@ def import_Heiser(deviance=False) -> anndata.AnnData:
134
data = anndata.read_h5ad("/home/nicoleb/C3TAg.h5ad")
135
if deviance:
136
# Apply deviance transformation
137
- data = prepare_dataset_deviance(data, "sample_id", geneThreshold=0.1)
+ return prepare_dataset_deviance(data, "sample_id", geneThreshold=0.1)
138
else:
139
# Apply standard normalization and scaling
140
- data = prepare_dataset(data, "sample_id", geneThreshold=0.1)
+ return prepare_dataset(data, "sample_id", geneThreshold=0.1)
141
142
- return prepare_dataset(data, "sample_id", geneThreshold=0.1)
143
144
145
def import_MouseImmune() -> anndata.AnnData:
0 commit comments