Merge branch 'main' into implicitflow

Author: geoffw0

.github/labeler.yml

@@ -45,11 +45,7 @@ documentation:
 
 # Since these are all shared files that need to be synced, just pick _one_ copy of each.
 "DataFlow Library":
-  - "java/ql/lib/semmle/code/java/dataflow/internal/DataFlowImpl.qll"
-  - "java/ql/lib/semmle/code/java/dataflow/internal/DataFlowImplCommon.qll"
-  - "java/ql/lib/semmle/code/java/dataflow/internal/tainttracking1/TaintTrackingImpl.qll"
-  - "java/ql/lib/semmle/code/java/dataflow/internal/DataFlowImplConsistency.qll"
-  - "java/ql/lib/semmle/code/java/dataflow/internal/FlowSummaryImpl.qll"
+  - "shared/dataflow/**/*"
 
 "ATM":
   - javascript/ql/experimental/adaptivethreatmodeling/**/*

.github/workflows/check-implicit-this.yml

@@ -13,7 +13,7 @@ jobs:
   check:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Check that implicit this warnings is enabled for all packs
         shell: bash
         run: |

.github/workflows/check-qldoc.yml

@@ -15,7 +15,7 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 2
 

.github/workflows/check-query-ids.yml

@@ -16,6 +16,6 @@ jobs:
     name: Check query IDs
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Check for duplicate query IDs
         run: python3 misc/scripts/check-query-ids.py

.github/workflows/codeql-analysis.yml

@@ -33,7 +33,7 @@ jobs:
         dotnet-version: 7.0.102
 
     - name: Checkout repository
-      uses: actions/checkout@v3
+      uses: actions/checkout@v4
 
     # Initializes the CodeQL tools for scanning.
     - name: Initialize CodeQL

.github/workflows/compile-queries.yml

@@ -13,7 +13,7 @@ jobs:
     runs-on: ubuntu-latest-xl
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Setup CodeQL
         uses: ./.github/actions/fetch-codeql
         with:

.github/workflows/csharp-qltest.yml

@@ -29,7 +29,7 @@ jobs:
   qlupgrade:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - uses: ./.github/actions/fetch-codeql
       - name: Check DB upgrade scripts
         run: |
@@ -52,8 +52,7 @@ jobs:
       matrix:
         slice: ["1/2", "2/2"]
     steps:
-      - uses: actions/checkout@v3
-      - uses: ./.github/actions/fetch-codeql
+      - uses: actions/checkout@v4
       - uses: ./csharp/actions/create-extractor-pack
       - name: Cache compilation cache
         id: query-cache
@@ -62,25 +61,37 @@ jobs:
           key: csharp-qltest-${{ matrix.slice }}
       - name: Run QL tests
         run: |
-          CODEQL_PATH=$(gh codeql version --format=json | jq -r .unpackedLocation)
-          # The legacy ASP extractor is not in this repo, so take the one from the nightly build
-          mv "$CODEQL_PATH/csharp/tools/extractor-asp.jar" "${{ github.workspace }}/csharp/extractor-pack/tools"
-          # Safe guard against using the bundled extractor
-          rm -rf "$CODEQL_PATH/csharp"
-          codeql test run --threads=0 --ram 50000 --slice ${{ matrix.slice }} --search-path "${{ github.workspace }}/csharp/extractor-pack" --check-databases --check-undefined-labels --check-repeated-labels --check-redefined-labels --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
+          codeql test run --threads=0 --ram 50000 --slice ${{ matrix.slice }} --search-path extractor-pack --check-databases --check-undefined-labels --check-repeated-labels --check-redefined-labels --consistency-queries ql/consistency-queries ql/test --compilation-cache "${{ steps.query-cache.outputs.cache-dir }}"
         env:
           GITHUB_TOKEN: ${{ github.token }}
   unit-tests:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Setup dotnet
         uses: actions/setup-dotnet@v3
         with:
           dotnet-version: 7.0.102
       - name: Extractor unit tests
         run: |
-          dotnet test -p:RuntimeFrameworkVersion=7.0.2 "${{ github.workspace }}/csharp/extractor/Semmle.Util.Tests"
-          dotnet test -p:RuntimeFrameworkVersion=7.0.2 "${{ github.workspace }}/csharp/extractor/Semmle.Extraction.Tests"
-          dotnet test -p:RuntimeFrameworkVersion=7.0.2 "${{ github.workspace }}/csharp/autobuilder/Semmle.Autobuild.CSharp.Tests"
+          dotnet test -p:RuntimeFrameworkVersion=7.0.2 extractor/Semmle.Util.Tests
+          dotnet test -p:RuntimeFrameworkVersion=7.0.2 extractor/Semmle.Extraction.Tests
+          dotnet test -p:RuntimeFrameworkVersion=7.0.2 autobuilder/Semmle.Autobuild.CSharp.Tests
           dotnet test -p:RuntimeFrameworkVersion=7.0.2 "${{ github.workspace }}/cpp/autobuilder/Semmle.Autobuild.Cpp.Tests"
+  stubgentest:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: ./csharp/actions/create-extractor-pack
+      - name: Run stub generator tests
+        run: |
+          # Generate (Asp)NetCore stubs
+          STUBS_PATH=stubs_output
+          python3 ql/src/Stubs/make_stubs_nuget.py webapp Swashbuckle.AspNetCore.Swagger latest "$STUBS_PATH"
+          rm -rf ql/test/resources/stubs/_frameworks
+          # Update existing stubs in the repo with the freshly generated ones
+          mv "$STUBS_PATH/output/stubs/_frameworks" ql/test/resources/stubs/
+          git status
+          codeql test run --threads=0 --search-path extractor-pack --check-databases --check-undefined-labels --check-repeated-labels --check-redefined-labels --consistency-queries ql/consistency-queries -- ql/test/library-tests/dataflow/flowsources/aspremote
+        env:
+          GITHUB_TOKEN: ${{ github.token }}

.github/workflows/csv-coverage-metrics.yml

@@ -19,7 +19,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
       - name: Setup CodeQL
         uses: ./.github/actions/fetch-codeql
       - name: Create empty database
@@ -47,7 +47,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
       - name: Setup CodeQL
         uses: ./.github/actions/fetch-codeql
       - name: Create empty database

.github/workflows/csv-coverage-pr-artifacts.yml

@@ -31,11 +31,11 @@ jobs:
           GITHUB_CONTEXT: ${{ toJSON(github.event) }}
         run: echo "$GITHUB_CONTEXT"
       - name: Clone self (github/codeql) - MERGE
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           path: merge
       - name: Clone self (github/codeql) - BASE
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           fetch-depth: 2
           path: base

.github/workflows/csv-coverage-pr-comment.yml

@@ -20,7 +20,7 @@ jobs:
         GITHUB_CONTEXT: ${{ toJSON(github.event) }}
       run: echo "$GITHUB_CONTEXT"
     - name: Clone self (github/codeql)
-      uses: actions/checkout@v3
+      uses: actions/checkout@v4
     - name: Set up Python 3.8
       uses: actions/setup-python@v4
       with: