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Corrected mistake in notebook, added informative readme and environment
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README.md

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# case_studies_Py
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# Collection of case studies using Pystan

rosi_py/README.md

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# Assesssing the Safety of a Drug
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## Setup
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Initial install:
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$ conda env create -f environment.yml
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$ source activate rosi_py
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Update:
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$ conda env update -f environment.yml
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Remove:
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$ conda remove -n rosi_py --all
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rosi_py/environment.yml

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name: rosi_py
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channels:
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- conda-forge
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- defaults
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dependencies:
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- appnope=0.1.0=py36_0
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- backports=1.0=py36_1
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- backports.functools_lru_cache=1.5=py36_0
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- blas=1.1=openblas
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- bleach=2.1.3=py_0
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- ca-certificates=2018.1.18=0
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- certifi=2018.1.18=py36_0
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- cycler=0.10.0=py36_0
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- decorator=4.2.1=py36_0
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- entrypoints=0.2.3=py36_1
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- freetype=2.8.1=0
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- html5lib=1.0.1=py_0
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- icu=58.2=0
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- ipykernel=4.8.2=py36_0
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- ipython=6.2.1=py36_1
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- ipython_genutils=0.2.0=py36_0
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- ipywidgets=7.1.2=py36_0
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- jedi=0.11.1=py36_0
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- jinja2=2.10=py36_0
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- jpeg=9b=2
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- jsonschema=2.6.0=py36_1
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- jupyter=1.0.0=py36_0
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- jupyter_client=5.2.3=py36_0
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- jupyter_console=5.2.0=py36_0
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- jupyter_core=4.4.0=py_0
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- kiwisolver=1.0.1=py36_1
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- libgfortran=3.0.0=0
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- libpng=1.6.34=0
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- libsodium=1.0.15=1
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- markupsafe=1.0=py36_0
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- matplotlib=2.2.0=py36_0
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- mistune=0.8.3=py_0
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- nbconvert=5.3.1=py_1
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- nbformat=4.4.0=py36_0
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- ncurses=5.9=10
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- notebook=5.4.0=py36_0
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- numpy=1.14.2=py36_blas_openblas_200
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- openblas=0.2.20=7
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- openssl=1.0.2n=0
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- pandas=0.22.0=py36_0
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- pandoc=2.1.2=0
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- pandocfilters=1.4.1=py36_0
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- parso=0.1.1=py_0
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- patsy=0.5.0=py36_0
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- pexpect=4.4.0=py36_0
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- pickleshare=0.7.4=py36_0
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- pip=9.0.1=py36_1
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- prompt_toolkit=1.0.15=py36_0
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- ptyprocess=0.5.2=py36_0
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- pygments=2.2.0=py36_0
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- pyparsing=2.2.0=py36_0
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- pyqt=5.6.0=py36_4
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- python=3.6.4=0
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- python-dateutil=2.6.1=py36_0
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- pytz=2018.3=py_0
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- pyzmq=17.0.0=py36_3
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- qt=5.6.2=h9e3eb04_4
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- qtconsole=4.3.1=py36_0
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- readline=7.0=0
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- scipy=1.0.0=py36_blas_openblas_201
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- seaborn=0.8.1=py36_0
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- send2trash=1.5.0=py_0
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- setuptools=38.5.2=py36_0
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- simplegeneric=0.8.1=py36_0
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- sip=4.18=py36_1
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- six=1.11.0=py36_1
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- sqlite=3.20.1=2
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- statsmodels=0.8.0=py36_0
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- terminado=0.8.1=py36_0
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- testpath=0.3.1=py36_0
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- tk=8.6.7=0
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- tornado=4.5.3=py36_0
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- traitlets=4.3.2=py36_0
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- wcwidth=0.1.7=py36_0
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- webencodings=0.5=py36_0
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- wheel=0.30.0=py36_2
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- widgetsnbextension=3.1.4=py36_0
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- xz=5.2.3=0
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- zeromq=4.2.3=2
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- zlib=1.2.11=0
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- pip:
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- cython==0.27.3
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- pystan==2.17.1.0
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prefix: /Users/itemgmt/anaconda2/envs/rosi_py
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