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.github/workflows/R-CMD-check.yaml

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R_KEEP_PKG_SOURCE: yes
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v5
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- uses: r-lib/actions/setup-pandoc@v2
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.github/workflows/docker-image.yml

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uses: docker/setup-buildx-action@v3
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- name: Build and push
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uses: docker/build-push-action@v5
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uses: docker/build-push-action@v6
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with:
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context: ./
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build-args: BUILD_DATE="$(date -u +'%Y-%m-%dT%H:%M:%SZ')"

.github/workflows/stale-actions.yml

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stale:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/stale@v3
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- uses: actions/stale@v10
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with:
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repo-token: ${{ secrets.GITHUB_TOKEN }}
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days-before-stale: 12

Dockerfile

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FROM rocker/rstudio:devel
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LABEL maintainer='Lampros Mouselimis'
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RUN export DEBIAN_FRONTEND=noninteractive; apt-get -y update && \
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apt-get install -y zlib1g-dev pandoc pandoc-citeproc make libfftw3-dev libicu-dev libpng-dev && \
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apt-get install -y zlib1g-dev pandoc make libfftw3-dev libicu-dev libpng-dev && \
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apt-get install -y sudo && \
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apt-get install -y libarmadillo-dev && \
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apt-get install -y libblas-dev && \
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apt-get install -y zlib1g-dev && \
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R -e "install.packages('devtools', dependencies = TRUE, repos = 'https://cloud.r-project.org/')" && \
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R -e "install.packages(c( 'Rcpp', 'RcppArmadillo', 'OpenImageR', 'R.matlab', 'glue', 'testthat', 'rmarkdown', 'knitr', 'remotes' ), repos = 'https://cloud.r-project.org/' )" && \
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R -e "remotes::install_github('mlampros/VMDecomp', upgrade = 'never', dependencies = FALSE, repos = 'https://cloud.r-project.org/')" && \
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apt-get autoremove -y && \
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apt-get clean
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apt-get clean && \
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rm -rf /var/lib/apt/lists/*
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ADD http://www.random.org/strings/?num=10&len=8&digits=on&upperalpha=on&loweralpha=on&unique=on&format=plain&rnd=new uuid
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ARG BUILD_DATE
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RUN echo "$BUILD_DATE"
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RUN R -e "remotes::install_github('mlampros/VMDecomp', upgrade = 'never', dependencies = FALSE, repos = 'https://cloud.r-project.org/')"
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ENV USER rstudio
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ENV USER=rstudio
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