unable to locate the script that creates a file used in 99-make_reports

[kalenkovich]

The group-level report in 99-make_reports.py loads the file eeg_faces_highpass-%sHz-ave.fif that I can't find in my files (even though I ran all the scripts) nor a reference to it in any of the scripts. Could you please help me locate this file or the script that should have produced it?

mne-biomag-group-demo/scripts/processing/99-make_reports.py

Line 87 in 6599461

faces_fname = op.join(meg_dir, 'eeg_faces_highpass-%sHz-ave.fif' % l_freq)

[jasmainak]

I think this needs to be updated to match this:

mne-biomag-group-demo/scripts/processing/11-group_average_sensors.py

Line 36 in 6599461

op.join(meg_dir, 'grand_average_highpass-%sHz-ave.fif' % l_freq),

By the way, this package is not actively maintained. You might get mileage from using:

https://github.com/mne-tools/mne-bids-pipeline

unless you're doing something specific to the Faces dataset

[kalenkovich]

Thank you @jasmainak! And sorry for replying so late.

We are using the analysis reported in Jas et al. (2018) and the code in this here repository as the basis for a tutorial on reproducible MEEG analysis and wanted to reproduce the group results from 99-make_reports.py. We ended up using the code in https://github.com/mne-tools/mne-biomag-group-demo/blob/master/scripts/results/group_analysis/plot_group.py.

[jasmainak]

I see, do feel free to share any educational materials that result from this. I'd be happy to share this with colleagues