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{file = "virtualenv-20.25.3-py3-none-any.whl", hash = "sha256:8aac4332f2ea6ef519c648d0bc48a5b1d324994753519919bddbb1aff25a104e"}, - {file = "virtualenv-20.25.3.tar.gz", hash = "sha256:7bb554bbdfeaacc3349fa614ea5bff6ac300fc7c335e9facf3a3bcfc703f45be"}, -] - -[package.dependencies] -distlib = ">=0.3.7,<1" -filelock = ">=3.12.2,<4" -platformdirs = ">=3.9.1,<5" - -[package.extras] -docs = ["furo (>=2023.7.26)", "proselint (>=0.13)", "sphinx (>=7.1.2,!=7.3)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=23.6)"] -test = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=23.1)", "pytest (>=7.4)", "pytest-env (>=0.8.2)", "pytest-freezer (>=0.4.8)", "pytest-mock (>=3.11.1)", "pytest-randomly (>=3.12)", "pytest-timeout (>=2.1)", "setuptools (>=68)", "time-machine (>=2.10)"] - -[metadata] -lock-version = "2.0" -python-versions = "^3.10" -content-hash = "546d2d6a5bde8cc472192aafd5cdef4a69c8cda7c3d4ed7dced4ef809890a263" diff --git a/pyproject.toml b/pyproject.toml index 0a9c405..b8d7a9d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,20 +1,32 @@ -[tool.poetry] +[project] name = "center-randomize" version = "0.1.0" -description = "" -authors = ["Manisha Bhandari "] +description = "Add your description here" +authors = [ + { name = "Manisha Bhandari", email = "manishabhandari841@gmail.com" } +] +dependencies = [ +] readme = "README.md" +requires-python = ">= 3.12" -[tool.poetry.dependencies] -python = "^3.10" -ruff = "^0.4.1" -pytest = "8.0.2" -pytest-clarity = "1.0.1" -pytest-sugar = "1.0.0" -pre-commit = "3.6.0" -pytest-cov = "5.0.0" +[build-system] +requires = ["hatchling"] +build-backend = "hatchling.build" +[tool.rye] +managed = true +dev-dependencies = [ + "pytest==8.0.2", + "pytest-clarity==1.0.1", + "pytest-sugar==1.0.0", + "pytest-cov==5.0.0", + "ruff==0.4.1", + "pre-commit==3.6.0", +] -[build-system] -requires = ["poetry-core"] -build-backend = "poetry.core.masonry.api" +[tool.hatch.metadata] +allow-direct-references = true + +[tool.hatch.build.targets.wheel] +packages = ["src/center_randomize"] diff --git a/requirements-dev.lock b/requirements-dev.lock new file mode 100644 index 0000000..0ee8a08 --- /dev/null +++ b/requirements-dev.lock @@ -0,0 +1,60 @@ +# generated by rye +# use `rye lock` or `rye sync` to update this lockfile +# +# last locked with the following flags: +# pre: false +# features: [] +# all-features: false +# with-sources: false + +-e file:. +cfgv==3.4.0 + # via pre-commit +colorama==0.4.6 + # via pytest +coverage==7.5.0 + # via pytest-cov +distlib==0.3.8 + # via virtualenv +filelock==3.13.4 + # via virtualenv +identify==2.5.36 + # via pre-commit +iniconfig==2.0.0 + # via pytest +markdown-it-py==3.0.0 + # via rich +mdurl==0.1.2 + # via markdown-it-py +nodeenv==1.8.0 + # via pre-commit +packaging==24.0 + # via pytest + # via pytest-sugar +platformdirs==4.2.1 + # via virtualenv +pluggy==1.5.0 + # via pytest +pprintpp==0.4.0 + # via pytest-clarity +pre-commit==3.6.0 +pygments==2.17.2 + # via rich +pytest==8.0.2 + # via pytest-clarity + # via pytest-cov + # via pytest-sugar +pytest-clarity==1.0.1 +pytest-cov==5.0.0 +pytest-sugar==1.0.0 +pyyaml==6.0.1 + # via pre-commit +rich==13.7.1 + # via pytest-clarity +ruff==0.4.1 +setuptools==69.5.1 + # via nodeenv +termcolor==2.4.0 + # via pytest-sugar +virtualenv==20.26.0 + # via pre-commit diff --git a/requirements.lock b/requirements.lock new file mode 100644 index 0000000..8f23096 --- /dev/null +++ b/requirements.lock @@ -0,0 +1,10 @@ +# generated by rye +# use `rye lock` or `rye sync` to update this lockfile +# +# last locked with the following flags: +# pre: false +# features: [] +# all-features: false +# with-sources: false + +-e file:. From 926115b7cd8914bc1a727476b9ef214a427a5ddc Mon Sep 17 00:00:00 2001 From: Manisha Bhandari Date: Sun, 28 Apr 2024 10:21:17 +0545 Subject: [PATCH 03/14] wip: update readme and added necessary dependencies --- CONTRIBUTION.md | 9 +- README.md | 2 +- pyproject.toml | 3 + requirements-dev.lock | 101 ++++++++++++++++++++ requirements.lock | 110 ++++++++++++++++++++++ requirements.txt => test_requirements.txt | 0 6 files changed, 220 insertions(+), 5 deletions(-) rename requirements.txt => test_requirements.txt (100%) diff --git a/CONTRIBUTION.md b/CONTRIBUTION.md index 2af015e..4bfdb46 100644 --- a/CONTRIBUTION.md +++ b/CONTRIBUTION.md @@ -19,10 +19,11 @@ Thank you for considering contributing to our project! We welcome contributions 1. Fork and clone the Repository 2. Pull latest changes from the main repository if it has diverged -3. [Create a virtual environment for the project](https://docs.python.org/3/library/venv.html) -4. Install dependencies using `pip install -r requirements.txt` -5. Install pre-commit hook using `pre-commit install` -6. Run tests using `pytest tests/test_file_name.py ` or specific test name like `pytest tests/test_file_name.py::test_function_name` +3. Add Rye on your system if it is not installed already. [Source](https://rye-up.com/guide/installation/) +4. Install all the dependencies using `rye sync`. +5. Install pre-commit hook using `rye run pre-commit install` +6. Run `rye add package_name` (if you wish to add any packages as per your requirements.) +6. Run tests using `rye run pytest` or `rye run pytest -k test_function_name -v` to run specific file. 7. Do not push changes without the tests and coverage passing 8. Commit your changes with **proper** commit messages in imperative form like `Add my best feature`, `Fix issues casusing whatever`, `Update docs` etc: [Good reference here](https://cbea.ms/git-commit/) 9. Make changes and push to your forked repository diff --git a/README.md b/README.md index f2d5265..bce68ef 100644 --- a/README.md +++ b/README.md @@ -71,7 +71,7 @@ scode cscode pref reason To run `school_center.py` use the command below: ```bash -python3 school_center.py sample_data/schools_grade12_2081.tsv sample_data/centers_grade12_2081.tsv sample_data/prefs.tsv +rye run python -m school_center sample_data/schools_grade12_2081.tsv sample_data/centers_grade12_2081.tsv sample_data/prefs.tsv ``` ## Output diff --git a/pyproject.toml b/pyproject.toml index b8d7a9d..8ada8a6 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -6,6 +6,9 @@ authors = [ { name = "Manisha Bhandari", email = "manishabhandari841@gmail.com" } ] dependencies = [ + "streamlit==1.33.0", + "streamlit-folium==0.19.1", + "folium==0.16.0", ] readme = "README.md" requires-python = ">= 3.12" diff --git a/requirements-dev.lock b/requirements-dev.lock index 0ee8a08..a7940db 100644 --- a/requirements-dev.lock +++ b/requirements-dev.lock @@ -8,9 +8,28 @@ # with-sources: false -e file:. +altair==5.3.0 + # via streamlit +attrs==23.2.0 + # via jsonschema + # via referencing +blinker==1.8.0 + # via streamlit +branca==0.7.2 + # via folium + # via streamlit-folium +cachetools==5.3.3 + # via streamlit +certifi==2024.2.2 + # via requests cfgv==3.4.0 # via pre-commit +charset-normalizer==3.3.2 + # via requests +click==8.1.7 + # via streamlit colorama==0.4.6 + # via click # via pytest coverage==7.5.0 # via pytest-cov @@ -18,19 +37,54 @@ distlib==0.3.8 # via virtualenv filelock==3.13.4 # via virtualenv +folium==0.16.0 + # via center-randomize + # via streamlit-folium +gitdb==4.0.11 + # via gitpython +gitpython==3.1.43 + # via streamlit identify==2.5.36 # via pre-commit +idna==3.7 + # via requests iniconfig==2.0.0 # via pytest +jinja2==3.1.3 + # via altair + # via branca + # via folium + # via pydeck + # via streamlit-folium +jsonschema==4.21.1 + # via altair +jsonschema-specifications==2023.12.1 + # via jsonschema markdown-it-py==3.0.0 # via rich +markupsafe==2.1.5 + # via jinja2 mdurl==0.1.2 # via markdown-it-py nodeenv==1.8.0 # via pre-commit +numpy==1.26.4 + # via altair + # via folium + # via pandas + # via pyarrow + # via pydeck + # via streamlit packaging==24.0 + # via altair # via pytest # via pytest-sugar + # via streamlit +pandas==2.2.2 + # via altair + # via streamlit +pillow==10.3.0 + # via streamlit platformdirs==4.2.1 # via virtualenv pluggy==1.5.0 @@ -38,6 +92,12 @@ pluggy==1.5.0 pprintpp==0.4.0 # via pytest-clarity pre-commit==3.6.0 +protobuf==4.25.3 + # via streamlit +pyarrow==16.0.0 + # via streamlit +pydeck==0.8.0 + # via streamlit pygments==2.17.2 # via rich pytest==8.0.2 @@ -47,14 +107,55 @@ pytest==8.0.2 pytest-clarity==1.0.1 pytest-cov==5.0.0 pytest-sugar==1.0.0 +python-dateutil==2.9.0.post0 + # via pandas +pytz==2024.1 + # via pandas pyyaml==6.0.1 # via pre-commit +referencing==0.35.0 + # via jsonschema + # via jsonschema-specifications +requests==2.31.0 + # via folium + # via streamlit rich==13.7.1 # via pytest-clarity + # via streamlit +rpds-py==0.18.0 + # via jsonschema + # via referencing ruff==0.4.1 setuptools==69.5.1 # via nodeenv +six==1.16.0 + # via python-dateutil +smmap==5.0.1 + # via gitdb +streamlit==1.33.0 + # via center-randomize + # via streamlit-folium +streamlit-folium==0.19.1 + # via center-randomize +tenacity==8.2.3 + # via streamlit termcolor==2.4.0 # via pytest-sugar +toml==0.10.2 + # via streamlit +toolz==0.12.1 + # via altair +tornado==6.4 + # via streamlit +typing-extensions==4.11.0 + # via streamlit +tzdata==2024.1 + # via pandas +urllib3==2.2.1 + # via requests virtualenv==20.26.0 # via pre-commit +watchdog==4.0.0 + # via streamlit +xyzservices==2024.4.0 + # via folium diff --git a/requirements.lock b/requirements.lock index 8f23096..622c8c5 100644 --- a/requirements.lock +++ b/requirements.lock @@ -8,3 +8,113 @@ # with-sources: false -e file:. +altair==5.3.0 + # via streamlit +attrs==23.2.0 + # via jsonschema + # via referencing +blinker==1.8.0 + # via streamlit +branca==0.7.2 + # via folium + # via streamlit-folium +cachetools==5.3.3 + # via streamlit +certifi==2024.2.2 + # via requests +charset-normalizer==3.3.2 + # via requests +click==8.1.7 + # via streamlit +colorama==0.4.6 + # via click +folium==0.16.0 + # via center-randomize + # via streamlit-folium +gitdb==4.0.11 + # via gitpython +gitpython==3.1.43 + # via streamlit +idna==3.7 + # via requests +jinja2==3.1.3 + # via altair + # via branca + # via folium + # via pydeck + # via streamlit-folium +jsonschema==4.21.1 + # via altair +jsonschema-specifications==2023.12.1 + # via jsonschema +markdown-it-py==3.0.0 + # via rich +markupsafe==2.1.5 + # via jinja2 +mdurl==0.1.2 + # via markdown-it-py +numpy==1.26.4 + # via altair + # via folium + # via pandas + # via pyarrow + # via pydeck + # via streamlit +packaging==24.0 + # via altair + # via streamlit +pandas==2.2.2 + # via altair + # via streamlit +pillow==10.3.0 + # via streamlit +protobuf==4.25.3 + # via streamlit +pyarrow==16.0.0 + # via streamlit +pydeck==0.8.0 + # via streamlit +pygments==2.17.2 + # via rich +python-dateutil==2.9.0.post0 + # via pandas +pytz==2024.1 + # via pandas +referencing==0.35.0 + # via jsonschema + # via jsonschema-specifications +requests==2.31.0 + # via folium + # via streamlit +rich==13.7.1 + # via streamlit +rpds-py==0.18.0 + # via jsonschema + # via referencing +six==1.16.0 + # via python-dateutil +smmap==5.0.1 + # via gitdb +streamlit==1.33.0 + # via center-randomize + # via streamlit-folium +streamlit-folium==0.19.1 + # via center-randomize +tenacity==8.2.3 + # via streamlit +toml==0.10.2 + # via streamlit +toolz==0.12.1 + # via altair +tornado==6.4 + # via streamlit +typing-extensions==4.11.0 + # via streamlit +tzdata==2024.1 + # via pandas +urllib3==2.2.1 + # via requests +watchdog==4.0.0 + # via streamlit +xyzservices==2024.4.0 + # via folium diff --git a/requirements.txt b/test_requirements.txt similarity index 100% rename from requirements.txt rename to test_requirements.txt From 26248998b4f940f47a5deb4778bf2a1b6f2adef5 Mon Sep 17 00:00:00 2001 From: Manisha Bhandari Date: Sun, 28 Apr 2024 12:28:41 +0545 Subject: [PATCH 04/14] add streamlit dependencies --- pyproject.toml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 8ada8a6..c4e6477 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -6,12 +6,12 @@ authors = [ { name = "Manisha Bhandari", email = "manishabhandari841@gmail.com" } ] dependencies = [ - "streamlit==1.33.0", "streamlit-folium==0.19.1", "folium==0.16.0", + "streamlit>=1.33.0", ] readme = "README.md" -requires-python = ">= 3.12" +requires-python = ">= 3.8" [build-system] requires = ["hatchling"] From 6e9cd476a9d207ecbbb8cc660bb26e1dbd3c8798 Mon Sep 17 00:00:00 2001 From: Manisha Bhandari Date: Sat, 4 May 2024 20:26:22 +0545 Subject: [PATCH 05/14] feat: update readme and contribution files --- README.md | 4 +++- pyproject.toml | 3 +++ requirements-dev.lock | 16 ++++++++-------- requirements.lock | 12 ++++++------ 4 files changed, 20 insertions(+), 15 deletions(-) diff --git a/README.md b/README.md index bce68ef..46a05a8 100644 --- a/README.md +++ b/README.md @@ -67,12 +67,14 @@ scode cscode pref reason ``` ## Command +You need to have [Rye](https://rye-up.com/guide/installation/) installed in your system to be able to run the project.Once you have it installed, run ```rye sync``` To run `school_center.py` use the command below: ```bash -rye run python -m school_center sample_data/schools_grade12_2081.tsv sample_data/centers_grade12_2081.tsv sample_data/prefs.tsv +rye run dev ``` +If you change the location of your sample files, make sure to update the command(cmd) in ```[tool.rye.scripts]``` in the ```pyproject.toml``` file with your file path and execute ```rye sync``` . If you wish to run any other files than ```school_center.py```, you can simply do ```rye run python file_name.py``` ## Output diff --git a/pyproject.toml b/pyproject.toml index c4e6477..18e243a 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -28,6 +28,9 @@ dev-dependencies = [ "pre-commit==3.6.0", ] +[tool.rye.scripts] +dev = { cmd = "python -m school_center sample_data/schools_grade12_2081.tsv sample_data/centers_grade12_2081.tsv sample_data/prefs.tsv", env = {} } + [tool.hatch.metadata] allow-direct-references = true diff --git a/requirements-dev.lock b/requirements-dev.lock index a7940db..3abab96 100644 --- a/requirements-dev.lock +++ b/requirements-dev.lock @@ -13,7 +13,7 @@ altair==5.3.0 attrs==23.2.0 # via jsonschema # via referencing -blinker==1.8.0 +blinker==1.8.1 # via streamlit branca==0.7.2 # via folium @@ -35,7 +35,7 @@ coverage==7.5.0 # via pytest-cov distlib==0.3.8 # via virtualenv -filelock==3.13.4 +filelock==3.14.0 # via virtualenv folium==0.16.0 # via center-randomize @@ -56,7 +56,7 @@ jinja2==3.1.3 # via folium # via pydeck # via streamlit-folium -jsonschema==4.21.1 +jsonschema==4.22.0 # via altair jsonschema-specifications==2023.12.1 # via jsonschema @@ -96,9 +96,9 @@ protobuf==4.25.3 # via streamlit pyarrow==16.0.0 # via streamlit -pydeck==0.8.0 +pydeck==0.9.0 # via streamlit -pygments==2.17.2 +pygments==2.18.0 # via rich pytest==8.0.2 # via pytest-clarity @@ -113,7 +113,7 @@ pytz==2024.1 # via pandas pyyaml==6.0.1 # via pre-commit -referencing==0.35.0 +referencing==0.35.1 # via jsonschema # via jsonschema-specifications requests==2.31.0 @@ -132,7 +132,7 @@ six==1.16.0 # via python-dateutil smmap==5.0.1 # via gitdb -streamlit==1.33.0 +streamlit==1.34.0 # via center-randomize # via streamlit-folium streamlit-folium==0.19.1 @@ -153,7 +153,7 @@ tzdata==2024.1 # via pandas urllib3==2.2.1 # via requests -virtualenv==20.26.0 +virtualenv==20.26.1 # via pre-commit watchdog==4.0.0 # via streamlit diff --git a/requirements.lock b/requirements.lock index 622c8c5..0a5ea38 100644 --- a/requirements.lock +++ b/requirements.lock @@ -13,7 +13,7 @@ altair==5.3.0 attrs==23.2.0 # via jsonschema # via referencing -blinker==1.8.0 +blinker==1.8.1 # via streamlit branca==0.7.2 # via folium @@ -43,7 +43,7 @@ jinja2==3.1.3 # via folium # via pydeck # via streamlit-folium -jsonschema==4.21.1 +jsonschema==4.22.0 # via altair jsonschema-specifications==2023.12.1 # via jsonschema @@ -72,15 +72,15 @@ protobuf==4.25.3 # via streamlit pyarrow==16.0.0 # via streamlit -pydeck==0.8.0 +pydeck==0.9.0 # via streamlit -pygments==2.17.2 +pygments==2.18.0 # via rich python-dateutil==2.9.0.post0 # via pandas pytz==2024.1 # via pandas -referencing==0.35.0 +referencing==0.35.1 # via jsonschema # via jsonschema-specifications requests==2.31.0 @@ -95,7 +95,7 @@ six==1.16.0 # via python-dateutil smmap==5.0.1 # via gitdb -streamlit==1.33.0 +streamlit==1.34.0 # via center-randomize # via streamlit-folium streamlit-folium==0.19.1 From 071f1c4d49e456589437759f26c52b2d039e209d Mon Sep 17 00:00:00 2001 From: Manisha Bhandari Date: Sun, 5 May 2024 21:05:21 +0545 Subject: [PATCH 06/14] update with main branch --- CONTRIBUTION.md | 12 ++++++------ pyproject.toml | 2 +- 2 files changed, 7 insertions(+), 7 deletions(-) diff --git a/CONTRIBUTION.md b/CONTRIBUTION.md index 4bfdb46..93ab4ad 100644 --- a/CONTRIBUTION.md +++ b/CONTRIBUTION.md @@ -22,12 +22,12 @@ Thank you for considering contributing to our project! We welcome contributions 3. Add Rye on your system if it is not installed already. [Source](https://rye-up.com/guide/installation/) 4. Install all the dependencies using `rye sync`. 5. Install pre-commit hook using `rye run pre-commit install` -6. Run `rye add package_name` (if you wish to add any packages as per your requirements.) -6. Run tests using `rye run pytest` or `rye run pytest -k test_function_name -v` to run specific file. -7. Do not push changes without the tests and coverage passing -8. Commit your changes with **proper** commit messages in imperative form like `Add my best feature`, `Fix issues casusing whatever`, `Update docs` etc: [Good reference here](https://cbea.ms/git-commit/) -9. Make changes and push to your forked repository -10. Create PR to the forked repository as mentioned below +6. Run `rye add package_name` (if you wish to add any packages as per your requirements.) and make sure to execute ```rye sync``` to add these dependencies in your working environment. +7. Run tests using `rye run pytest` or `rye run pytest -k test_function_name -v` to run specific file. +8. Do not push changes without the tests and coverage passing +9. Commit your changes with **proper** commit messages in imperative form like `Add my best feature`, `Fix issues causing whatever`, `Update docs` etc: [Good reference here](https://cbea.ms/git-commit/) +10. Make changes and push to your forked repository +11. Create PR to the forked repository as mentioned below ### Pull Requests (PRs): diff --git a/pyproject.toml b/pyproject.toml index 18e243a..f9df1b1 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,7 +1,7 @@ [project] name = "center-randomize" version = "0.1.0" -description = "Add your description here" +description = "Exam Center Randomization Script" authors = [ { name = "Manisha Bhandari", email = "manishabhandari841@gmail.com" } ] From d3a07f42012ed4723fdd9ba021f1dcbd30984ed4 Mon Sep 17 00:00:00 2001 From: Manisha Date: Tue, 21 May 2024 21:07:33 +0545 Subject: [PATCH 07/14] fix: update author info --- pyproject.toml | 4 ++-- requirements-dev.lock | 10 +++++++--- requirements.lock | 8 ++++---- 3 files changed, 13 insertions(+), 9 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index f9df1b1..7793803 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -3,7 +3,7 @@ name = "center-randomize" version = "0.1.0" description = "Exam Center Randomization Script" authors = [ - { name = "Manisha Bhandari", email = "manishabhandari841@gmail.com" } + { name = "moest-np" } ] dependencies = [ "streamlit-folium==0.19.1", @@ -11,7 +11,7 @@ dependencies = [ "streamlit>=1.33.0", ] readme = "README.md" -requires-python = ">= 3.8" +requires-python = ">= 3.9" [build-system] requires = ["hatchling"] diff --git a/requirements-dev.lock b/requirements-dev.lock index 3abab96..63b3cbd 100644 --- a/requirements-dev.lock +++ b/requirements-dev.lock @@ -6,6 +6,7 @@ # features: [] # all-features: false # with-sources: false +# generate-hashes: false -e file:. altair==5.3.0 @@ -28,13 +29,12 @@ charset-normalizer==3.3.2 # via requests click==8.1.7 # via streamlit -colorama==0.4.6 - # via click - # via pytest coverage==7.5.0 # via pytest-cov distlib==0.3.8 # via virtualenv +exceptiongroup==1.2.1 + # via pytest filelock==3.14.0 # via virtualenv folium==0.16.0 @@ -143,11 +143,15 @@ termcolor==2.4.0 # via pytest-sugar toml==0.10.2 # via streamlit +tomli==2.0.1 + # via coverage + # via pytest toolz==0.12.1 # via altair tornado==6.4 # via streamlit typing-extensions==4.11.0 + # via altair # via streamlit tzdata==2024.1 # via pandas diff --git a/requirements.lock b/requirements.lock index 0a5ea38..f13cfdb 100644 --- a/requirements.lock +++ b/requirements.lock @@ -6,6 +6,7 @@ # features: [] # all-features: false # with-sources: false +# generate-hashes: false -e file:. altair==5.3.0 @@ -26,8 +27,6 @@ charset-normalizer==3.3.2 # via requests click==8.1.7 # via streamlit -colorama==0.4.6 - # via click folium==0.16.0 # via center-randomize # via streamlit-folium @@ -53,7 +52,7 @@ markupsafe==2.1.5 # via jinja2 mdurl==0.1.2 # via markdown-it-py -numpy==1.26.4 +numpy==1.24.4 # via altair # via folium # via pandas @@ -63,7 +62,7 @@ numpy==1.26.4 packaging==24.0 # via altair # via streamlit -pandas==2.2.2 +pandas==2.0.3 # via altair # via streamlit pillow==10.3.0 @@ -109,6 +108,7 @@ toolz==0.12.1 tornado==6.4 # via streamlit typing-extensions==4.11.0 + # via altair # via streamlit tzdata==2024.1 # via pandas From e825b35fbaa022cabe307fdc237acfc202943607 Mon Sep 17 00:00:00 2001 From: Devndra Date: Fri, 31 May 2024 23:20:29 +0300 Subject: [PATCH 08/14] Setup ryte github actions --- .github/workflows/code_coverage.yml | 57 ++++++++++++++++++----------- 1 file changed, 35 insertions(+), 22 deletions(-) diff --git a/.github/workflows/code_coverage.yml b/.github/workflows/code_coverage.yml index ffe6afb..06fa813 100644 --- a/.github/workflows/code_coverage.yml +++ b/.github/workflows/code_coverage.yml @@ -1,26 +1,39 @@ name: "Code Coverage" -on: [push, pull_request] +on: [ push, pull_request ] jobs: - coverage: - runs-on: ubuntu-latest - steps: - - uses: actions/checkout@v4 - - name: Set up Python - uses: actions/setup-python@v5 - with: - python-version: '3.11' - - name: Install dependencies - run: | - pip install -r requirements.txt - - name: Run pytest with coverage - run: | - pytest --cov=./ --cov-report=xml - - name: Upload coverage to Codecov - uses: codecov/codecov-action@v1 - with: - file: ./coverage.xml - flags: unittests - name: codecov-umbrella - fail_ci_if_error: false + build: + runs-on: ubuntu-latest + strategy: + matrix: + python-version: [ "3.11.3" ] + steps: + - uses: actions/checkout@v4 + - uses: eifinger/setup-rye@v3 + id: setup-rye + with: + enable-cache: true + cache-prefix: ${{ matrix.python-version }} + - name: Pin python-version ${{ matrix.python-version }} + if: steps.setup-rye.outputs.cache-hit != 'true' + run: rye pin ${{ matrix.python-version }} + - name: Install dependencies + if: steps.setup-rye.outputs.cache-hit != 'true' + run: | + rye sync --no-lock + - name: Cache pre-commit + uses: actions/cache@ab5e6d0c87105b4c9c2047343972218f562e4319 # v4.0.1 + with: + path: ~/.cache/pre-commit + key: pre-commit-|${{ matrix.python-version }}|${{ hashFiles('.pre-commit-config.yaml') }} + - name: Lint + run: | + rye run pre-commit run --all-files + - name: Test + run: | + rye run pytest --cov=src --cov-report=html + - name: Upload coverage to Codecov + uses: codecov/codecov-action@v1 + with: + file: ./htmlcov/index.html From f26c59b9eed2278d74617aefdd5beefa75a76c5b Mon Sep 17 00:00:00 2001 From: Devndra Date: Mon, 3 Jun 2024 19:20:40 +0300 Subject: [PATCH 09/14] Fix workflow to support rye --- .github/workflows/code_coverage.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/code_coverage.yml b/.github/workflows/code_coverage.yml index 06fa813..d5551fe 100644 --- a/.github/workflows/code_coverage.yml +++ b/.github/workflows/code_coverage.yml @@ -31,8 +31,8 @@ jobs: run: | rye run pre-commit run --all-files - name: Test - run: | - rye run pytest --cov=src --cov-report=html + run: | + rye run pytest - name: Upload coverage to Codecov uses: codecov/codecov-action@v1 with: From ba56e5b66957d8c4c1d1db346f25c84ed7ff9195 Mon Sep 17 00:00:00 2001 From: Devndra Date: Mon, 3 Jun 2024 19:23:36 +0300 Subject: [PATCH 10/14] Rename test to tests --- .gitignore | 2 +- {test => tests}/__init__.py | 0 {test => tests}/test_results.py | 2 +- {test => tests}/utils/__init__.py | 0 {test => tests}/utils/custom_tsv_parser.py | 0 5 files changed, 2 insertions(+), 2 deletions(-) rename {test => tests}/__init__.py (100%) rename {test => tests}/test_results.py (99%) rename {test => tests}/utils/__init__.py (100%) rename {test => tests}/utils/custom_tsv_parser.py (100%) diff --git a/.gitignore b/.gitignore index 5db624a..c38126e 100644 --- a/.gitignore +++ b/.gitignore @@ -37,7 +37,7 @@ var/ pip-log.txt pip-delete-this-directory.txt -# Unit test / coverage reports +# Unit tests / coverage reports htmlcov/ .tox/ .coverage diff --git a/test/__init__.py b/tests/__init__.py similarity index 100% rename from test/__init__.py rename to tests/__init__.py diff --git a/test/test_results.py b/tests/test_results.py similarity index 99% rename from test/test_results.py rename to tests/test_results.py index d855aa7..01e33d2 100644 --- a/test/test_results.py +++ b/tests/test_results.py @@ -7,7 +7,7 @@ # Add the parent directory to the Python path sys.path.append(os.path.dirname(os.path.dirname(os.path.abspath(__file__)))) -from test.utils.custom_tsv_parser import ParseTSVFile +from tests.utils.custom_tsv_parser import ParseTSVFile PREF_CUTOFF = -4 diff --git a/test/utils/__init__.py b/tests/utils/__init__.py similarity index 100% rename from test/utils/__init__.py rename to tests/utils/__init__.py diff --git a/test/utils/custom_tsv_parser.py b/tests/utils/custom_tsv_parser.py similarity index 100% rename from test/utils/custom_tsv_parser.py rename to tests/utils/custom_tsv_parser.py From 600d216ae2864c22e866505a76fbb3fe5c801c30 Mon Sep 17 00:00:00 2001 From: Devndra Date: Mon, 3 Jun 2024 19:27:11 +0300 Subject: [PATCH 11/14] Do not cache pre-commit --- .github/workflows/code_coverage.yml | 5 ----- 1 file changed, 5 deletions(-) diff --git a/.github/workflows/code_coverage.yml b/.github/workflows/code_coverage.yml index d5551fe..c091562 100644 --- a/.github/workflows/code_coverage.yml +++ b/.github/workflows/code_coverage.yml @@ -22,11 +22,6 @@ jobs: if: steps.setup-rye.outputs.cache-hit != 'true' run: | rye sync --no-lock - - name: Cache pre-commit - uses: actions/cache@ab5e6d0c87105b4c9c2047343972218f562e4319 # v4.0.1 - with: - path: ~/.cache/pre-commit - key: pre-commit-|${{ matrix.python-version }}|${{ hashFiles('.pre-commit-config.yaml') }} - name: Lint run: | rye run pre-commit run --all-files From 1e2d21a8a0b8f76299523c28678400137f856d3b Mon Sep 17 00:00:00 2001 From: Devndra Date: Mon, 3 Jun 2024 19:49:05 +0300 Subject: [PATCH 12/14] Use rye lint instead --- .github/workflows/code_coverage.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/code_coverage.yml b/.github/workflows/code_coverage.yml index c091562..7e97211 100644 --- a/.github/workflows/code_coverage.yml +++ b/.github/workflows/code_coverage.yml @@ -24,7 +24,7 @@ jobs: rye sync --no-lock - name: Lint run: | - rye run pre-commit run --all-files + rye lint -a - name: Test run: | rye run pytest From 553c8e2216a388538da45a0481347baf258423f7 Mon Sep 17 00:00:00 2001 From: Devndra Date: Mon, 3 Jun 2024 22:40:39 +0300 Subject: [PATCH 13/14] Remove cache --- .github/workflows/code_coverage.yml | 45 ++++++++++++++--------------- 1 file changed, 22 insertions(+), 23 deletions(-) diff --git a/.github/workflows/code_coverage.yml b/.github/workflows/code_coverage.yml index 7e97211..296d3d1 100644 --- a/.github/workflows/code_coverage.yml +++ b/.github/workflows/code_coverage.yml @@ -9,26 +9,25 @@ jobs: matrix: python-version: [ "3.11.3" ] steps: - - uses: actions/checkout@v4 - - uses: eifinger/setup-rye@v3 - id: setup-rye - with: - enable-cache: true - cache-prefix: ${{ matrix.python-version }} - - name: Pin python-version ${{ matrix.python-version }} - if: steps.setup-rye.outputs.cache-hit != 'true' - run: rye pin ${{ matrix.python-version }} - - name: Install dependencies - if: steps.setup-rye.outputs.cache-hit != 'true' - run: | - rye sync --no-lock - - name: Lint - run: | - rye lint -a - - name: Test - run: | - rye run pytest - - name: Upload coverage to Codecov - uses: codecov/codecov-action@v1 - with: - file: ./htmlcov/index.html + - uses: actions/checkout@v4 + - uses: eifinger/setup-rye@v3 + id: setup-rye + with: + cache-prefix: ${{ matrix.python-version }} + + - name: Pin python-version ${{ matrix.python-version }} + run: rye pin ${{ matrix.python-version }} + + - name: Install dependencies + run: rye sync --no-lock + + - name: Lint + run: rye lint -a + + - name: Test + run: rye run pytest + + - name: Upload coverage to Codecov + uses: codecov/codecov-action@v1 + with: + file: ./htmlcov/index.html From 33c531a703a51b818030c200845a50d6fe900074 Mon Sep 17 00:00:00 2001 From: Devndra Date: Mon, 3 Jun 2024 22:43:15 +0300 Subject: [PATCH 14/14] Reduce coverage to 70 for ci check --- pytest.ini | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pytest.ini b/pytest.ini index 025b67b..bb20a82 100644 --- a/pytest.ini +++ b/pytest.ini @@ -1,2 +1,2 @@ [pytest] -addopts = --cov=. --cov-fail-under 80 --cov-report term --cov-report html --maxfail 1 --force-sugar +addopts = --cov=. --cov-fail-under 70 --cov-report term --cov-report html --maxfail 1 --force-sugar