|
20 | 20 | import demes |
21 | 21 | import fwdpy11 |
22 | 22 | import pytest |
| 23 | +import tskit |
| 24 | + |
| 25 | +from dataclasses import dataclass |
23 | 26 |
|
24 | 27 |
|
25 | 28 | @pytest.fixture |
@@ -117,3 +120,64 @@ def test_seed(pop): |
117 | 120 |
|
118 | 121 | with pytest.raises(ValueError): |
119 | 122 | _ = pop.dump_tables_to_tskit(seed=-333) |
| 123 | + |
| 124 | + |
| 125 | +def test_toplevel_metadata_0(): |
| 126 | + tc = tskit.TableCollection(10.0) |
| 127 | + tc.metadata_schema = fwdpy11.tskit_tools.metadata_schema.TopLevelMetadata |
| 128 | + md = {"generation": 100, "data": {0.0: [0, 1, 2]}} |
| 129 | + tc.metadata = md |
| 130 | + data = tc.metadata["data"] |
| 131 | + assert 0.0 not in data |
| 132 | + assert "0.0" in data |
| 133 | + |
| 134 | + |
| 135 | +def test_toplevel_metadata_1(): |
| 136 | + # Same as previous test, but w/no schema |
| 137 | + # and we just shove raw bytes in there |
| 138 | + tc = tskit.TableCollection(10.0) |
| 139 | + md = {"generation": 100, "data": {0.0: [0, 1, 2]}} |
| 140 | + tc.metadata = str(md).encode() |
| 141 | + decoded = eval(tc.metadata) |
| 142 | + data = decoded["data"] |
| 143 | + assert 0.0 in data |
| 144 | + |
| 145 | + |
| 146 | +def test_toplevel_metadata_2(): |
| 147 | + # This time w/a JSON codec |
| 148 | + tc = tskit.TableCollection(10.0) |
| 149 | + schema = tskit.metadata.MetadataSchema( |
| 150 | + { |
| 151 | + "codec": "json", |
| 152 | + } |
| 153 | + ) |
| 154 | + tc.metadata_schema = schema |
| 155 | + md = {"generation": 100, "data": {0.0: [0, 1, 2]}} |
| 156 | + |
| 157 | + tc.metadata = md |
| 158 | + decoded = tc.metadata |
| 159 | + data = decoded["data"] |
| 160 | + assert 0.0 not in data |
| 161 | + assert "0.0" in data |
| 162 | + |
| 163 | + |
| 164 | +@dataclass(eq=True, frozen=True) |
| 165 | +class FloatWrap: |
| 166 | + value: float |
| 167 | + |
| 168 | + |
| 169 | +def test_toplevel_metadata_3(): |
| 170 | + |
| 171 | + # This time w/a JSON codec |
| 172 | + tc = tskit.TableCollection(10.0) |
| 173 | + schema = tskit.metadata.MetadataSchema( |
| 174 | + { |
| 175 | + "codec": "json", |
| 176 | + } |
| 177 | + ) |
| 178 | + tc.metadata_schema = schema |
| 179 | + md = {"data": {FloatWrap(0.0): [0, 1, 2]}} |
| 180 | + tc.metadata = str(md) |
| 181 | + decoded = eval(tc.metadata) |
| 182 | + data = decoded["data"] |
| 183 | + assert FloatWrap(0.0) in data |
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