bump pybind11 to 3.0 (#1387)

Author: molpopgen

CMakeLists.txt

@@ -21,8 +21,8 @@ find_package(Python COMPONENTS Interpreter Development.Module)
 find_package(pybind11 CONFIG)
 
 message(STATUS "Found pybind11: ${pybind11_VERSION}")
-if(${pybind11_VERSION} VERSION_LESS '2.12.0')
-    message(FATAL_ERROR "pybind11 version must be >= '2.12.0'")
+if(${pybind11_VERSION} VERSION_LESS '3.0')
+    message(FATAL_ERROR "pybind11 version must be >= '3.0'")
 endif()
 add_definitions(-DPYBIND11_VERSION="${pybind11_VERSION}")
 

pyproject.toml

@@ -3,7 +3,7 @@
 requires = [
     "scikit-build-core==0.11.1",
     "setuptools_scm==7.1.0",
-    "pybind11[global]==2.12.0",
+    "pybind11[global]==3.0",
     "numpy >= 2.0"
 ]
 build-backend = "scikit_build_core.build"
@@ -40,7 +40,7 @@ requires-python = ">=3.10, <3.14"
 build = [
     "scikit-build-core==0.11.1",
     "setuptools_scm==7.1.0",
-    "pybind11[global]==2.12.0",
+    "pybind11[global]==3.0",
     "numpy >= 2.0"
 ]
 format = [