chore: fix issues with deaplign

Author: gagik

.depalignrc.json

@@ -1,27 +1,11 @@
 {
   "ignore": {
-    "@babel/core": [
-      "^7.26.10"
-    ],
-    "yaml": [
-      "^2.3.1",
-      "^1.10.0"
-    ],
-    "eslint-plugin-mocha": [
-      "^8.0.0",
-      "^9.0.0"
-    ],
-    "@typescript-eslint/eslint-plugin": [
-      "^5.59.0",
-      "^4.33.0"
-    ],
-    "@typescript-eslint/parser": [
-      "^5.59.0",
-      "^4.33.0"
-    ],
-    "node-fetch": [
-      "^3.3.2",
-      "2.6.12"
-    ]
+    "@babel/core": ["^7.26.10"],
+    "bson": ["^6.10.4", "^6.10.4 | ^7.0.0"],
+    "yaml": ["^2.3.1", "^1.10.0"],
+    "eslint-plugin-mocha": ["^8.0.0", "^9.0.0"],
+    "@typescript-eslint/eslint-plugin": ["^5.59.0", "^4.33.0"],
+    "@typescript-eslint/parser": ["^5.59.0", "^4.33.0"],
+    "node-fetch": ["^3.3.2", "2.6.12"]
   }
-}
+}

configs/eslint-config-mongosh/package.json

@@ -28,7 +28,7 @@
     "eslint-plugin-react-hooks": "^4.2.0"
   },
   "devDependencies": {
-    "prettier": "^2.7.1"
+    "prettier": "^2.8.8"
   },
   "scripts": {
     "check": "npm run lint",

configs/tsconfig-mongosh/package.json

@@ -11,8 +11,8 @@
     "typescript": "^5.3.3"
   },
   "devDependencies": {
-    "@mongodb-js/prettier-config-devtools": "^1.0.0",
-    "prettier": "^2.7.1"
+    "@mongodb-js/prettier-config-devtools": "^1.0.1",
+    "prettier": "^2.8.8"
   },
   "scripts": {
     "check": "npm run lint",

knip.ts

@@ -13,26 +13,16 @@ const config: KnipConfig = {
     "**/tmp/**",
     "**/.sbom/**",
     "**/test/data/**",
-    // Docker and scripts that are executed directly
-    "scripts/docker/**",
-    // Async rewriter3 has its own build system (Rust/WASM)
-    "packages/async-rewriter3/**",
     // Configuration files (from depcheck ignore-patterns)
     ".evergreen/**",
     "config/**",
     "configs/**",
     "**/.eslintrc.js",
+    "testing/tsconfig.json",
   ],
 
-  // Global ignore dependencies (used across multiple packages or in special contexts)
-  ignoreDependencies: [
-    // Common dev tooling that appears in .depcheckrc files (peer dependencies)
-    "@mongodb-js/tsconfig-mongosh",
-    "@mongodb-js/prettier-config-devtools",
-  ],
-
-  // Ignore binaries that are used in scripts
-  ignoreBinaries: ["lerna", "mongodb-sbom-tools", "prettier"],
+  // Received from @mongodb-js/sbom-tools
+  ignoreBinaries: ["mongodb-sbom-tools"],
 
   // Workspace-specific configurations
   workspaces: {