Merge pull request #179 from mrc-ide/upgrade-odin

Regenerate with newer odin

Author: OJWatson

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: squire
 Type: Package
 Title: SEIR transmission model of COVID-19
-Version: 0.7.0
+Version: 0.7.1
 Authors@R: c(
   person("OJ", "Watson", email = "o.watson15@imperial.ac.uk", role = c("aut", "cre")),
   person("Patrick", "Walker", email = "patrick.walker06@imperial.ac.uk", role = c("aut")),
@@ -26,7 +26,7 @@ Suggests:
     mockery
 RoxygenNote: 7.1.2
 Imports: 
-    odin (>= 1.1.0),
+    odin (>= 1.2.4),
     dde (>= 1.0.2),
     dplyr,
     tidyr,

R/odin.R

@@ -1,4 +1,4 @@
-## Automatically generated by odin 1.1.6 - do not edit
+## Automatically generated by odin 1.2.4 - do not edit
 explicit_SEIR_deterministic_ <- R6::R6Class(
   "odin_model",
   cloneable = FALSE,
@@ -131,6 +131,7 @@ explicit_SEIR_deterministic_ <- R6::R6Class(
 
 explicit_SEIR_deterministic <- function(..., user = list(...), use_dde = FALSE,
                      unused_user_action = NULL) {
+  asNamespace("odin")$deprecated_constructor_call("explicit_SEIR_deterministic")
   explicit_SEIR_deterministic_$new(user = user, use_dde = use_dde,
                 unused_user_action = unused_user_action)
 }
@@ -261,6 +262,7 @@ explicit_SEIR_ <- R6::R6Class(
 
 explicit_SEIR <- function(..., user = list(...), use_dde = FALSE,
                      unused_user_action = NULL) {
+  asNamespace("odin")$deprecated_constructor_call("explicit_SEIR")
   explicit_SEIR_$new(user = user, use_dde = use_dde,
                 unused_user_action = unused_user_action)
 }
@@ -379,6 +381,7 @@ less_basic_model_for_js_ <- R6::R6Class(
 
 less_basic_model_for_js <- function(..., user = list(...), use_dde = FALSE,
                      unused_user_action = NULL) {
+  asNamespace("odin")$deprecated_constructor_call("less_basic_model_for_js")
   less_basic_model_for_js_$new(user = user, use_dde = use_dde,
                 unused_user_action = unused_user_action)
 }
@@ -492,6 +495,7 @@ simple_SEIR_ <- R6::R6Class(
 
 simple_SEIR <- function(..., user = list(...), use_dde = FALSE,
                      unused_user_action = NULL) {
+  asNamespace("odin")$deprecated_constructor_call("simple_SEIR")
   simple_SEIR_$new(user = user, use_dde = use_dde,
                 unused_user_action = unused_user_action)
 }