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DESCRIPTION
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Package: gTrack
Title: Plotting multiple tracks of complex genomic data across multiple genomic
windows
Version: 0.1.0
Maintainer: Marcin Imielinski <mimielinski@nygenome.org>
Authors@R: c(person(given = "Jeremiah", family = "Wala", role = c("aut"), email = "jwala@broadinstitute.org"),
person(given = "Marcin",
family = "Imielinski", role = c("aut", "cre"), email =
"mimielinski@nygenome.org"))
Description: Object for plotting GRanges, RleList, UCSC file formats, and
ffTrack objects in multi-track panels.
Remotes:
github::mskilab/gUtils
biocViews:
bioc::3.10/S4Vectors,
bioc::3.10/GenomicRanges,
bioc::3.10/rtracklayer,
bioc::3.10/VariantAnnotation,
bioc::3.10/Biostrings,
bioc::3.10/GenomeInfoDb
Depends:
R (>= 3.6.0),
GenomicRanges (>= 1.30),
data.table (>= 1.10),
gUtils
Imports:
IRanges (>= 2.12),
S4Vectors (>= 0.4),
GenomeInfoDb (>= 1.13),
Matrix,
RColorBrewer,
data.table,
methods,
Rcpp,
RCurl,
rtracklayer,
BiocGenerics
LinkingTo: Rcpp
License: GPL-2
LazyData: true
BugReports: http://github.com/mskilab/gTrack/issues
RoxygenNote: 7.2.3
Suggests:
testthat (>= 2.0),
covr,
pkgdown,
spatstat