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Carlos Hernandez
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use msmb_data
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osprey/tests/test_dataset_loader.py

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@@ -147,11 +147,13 @@ def test_DSVDatasetLoader_1():
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def test_MDTrajDatasetLoader_1():
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from mdtraj.testing import get_fn
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loader = MDTrajDatasetLoader(get_fn('legacy_msmbuilder_trj0.lh5'))
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from msmbuilder.example_datasets import FsPeptide
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fs_pept = FsPeptide()
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loader = MDTrajDatasetLoader(os.path.join(fs_pept.data_dir, '*.xtc'),
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topology=os.path.join(fs_pept.data_dir, 'fs-peptide.pdb'))
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X, y = loader.load()
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assert X[0].n_frames == 501
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assert len(X) == 28
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assert y is None
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