🚨 update pre-commit, lockfile, and adjust for Qiskit 1.3 (#574)

## Description

This PR updates combines a couple of updates for the project
configuration that are long overdue.

## Checklist:

<!---
This checklist serves as a reminder of a couple of things that ensure
your pull request will be merged swiftly.
-->

- [x] The pull request only contains commits that are related to it.
- [x] I have added appropriate tests and documentation.
- [x] I have made sure that all CI jobs on GitHub pass.
- [x] The pull request introduces no new warnings and follows the
project's style guidelines.

---------

Signed-off-by: burgholzer <[email protected]>

Author: burgholzer

.github/workflows/cd.yml

@@ -17,7 +17,7 @@ jobs:
   # whether the workflow is triggered from a PR, a push to main, or a release, respectively.
   python-packaging:
     name: 🐍 Packaging
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-packaging.yml@v1.4
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-packaging.yml@v1.5
     with:
       # Do not include local version information on pushes to main to facilitate TestPyPI uploads.
       no-local-version: ${{ github.ref == 'refs/heads/main' && github.event_name == 'push' }}
@@ -64,7 +64,7 @@ jobs:
           path: dist
           merge-multiple: true
       - name: Generate artifact attestation for sdist and wheel(s)
-        uses: actions/attest-build-provenance@v1.4.4
+        uses: actions/attest-build-provenance@v2
         with:
           subject-path: "dist/*"
       - uses: pypa/gh-action-pypi-publish@release/v1

.github/workflows/ci.yml

@@ -14,45 +14,45 @@ concurrency:
 jobs:
   change-detection:
     name: 🔍 Change
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-change-detection.yml@v1.4
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-change-detection.yml@v1.5
 
   cpp-tests:
     name: 🇨‌ Test
     needs: change-detection
     if: fromJSON(needs.change-detection.outputs.run-cpp-tests)
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-cpp-ci.yml@v1.4
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-cpp-ci.yml@v1.5
     with:
       setup-z3: true
 
   cpp-linter:
     name: 🇨‌ Lint
     needs: change-detection
     if: fromJSON(needs.change-detection.outputs.run-cpp-linter)
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-cpp-linter.yml@v1.4
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-cpp-linter.yml@v1.5
     with:
       setup-z3: true
 
   python-tests:
     name: 🐍 Test
     needs: change-detection
     if: fromJSON(needs.change-detection.outputs.run-python-tests)
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-ci.yml@v1.4
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-ci.yml@v1.5
     with:
       setup-z3: true
 
   code-ql:
     name: 📝 CodeQL
     needs: change-detection
     if: fromJSON(needs.change-detection.outputs.run-code-ql)
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-code-ql.yml@v1.4
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-code-ql.yml@v1.5
     with:
       setup-z3: true
 
   cd:
     name: 🚀 CD
     needs: change-detection
     if: fromJSON(needs.change-detection.outputs.run-cd)
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-packaging.yml@v1.4
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-packaging.yml@v1.5
     with:
       setup-z3: true
       # 4.13.0 has incorrectly tagged manylinux wheels

.github/workflows/update-mqt-core.yml

@@ -21,6 +21,6 @@ concurrency:
 jobs:
   update-mqt-core:
     name: ⬆️ Update MQT Core
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-mqt-core-update.yml@v1.4
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-mqt-core-update.yml@v1.5
     with:
       update-to-head: ${{ github.event.inputs.update-to-head == 'true' }}

.pre-commit-config.yaml

@@ -57,7 +57,7 @@ repos:
 
   # Python linting using ruff
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.7.4
+    rev: v0.8.2
     hooks:
       - id: ruff
         args: ["--fix", "--show-fixes"]
@@ -89,13 +89,13 @@ repos:
 
   # Check for spelling
   - repo: https://github.com/crate-ci/typos
-    rev: v1.28.2
+    rev: typos-dict-v0.11.37
     hooks:
       - id: typos
 
   # Clang-format the C++ part of the code base automatically
   - repo: https://github.com/pre-commit/mirrors-clang-format
-    rev: v19.1.4
+    rev: v19.1.5
     hooks:
       - id: clang-format
         types_or: [c++, c, cuda]
@@ -111,7 +111,7 @@ repos:
 
   # Format configuration files with prettier
   - repo: https://github.com/rbubley/mirrors-prettier
-    rev: v3.4.1
+    rev: v3.4.2
     hooks:
       - id: prettier
         types_or: [yaml, markdown, html, css, scss, javascript, json]
@@ -142,6 +142,6 @@ repos:
 
   # Check the pyproject.toml file
   - repo: https://github.com/henryiii/validate-pyproject-schema-store
-    rev: 2024.11.11
+    rev: 2024.11.25
     hooks:
       - id: validate-pyproject

noxfile.py

@@ -61,13 +61,13 @@ def _run_tests(
     if shutil.which("ninja") is None:
         session.install("ninja")
 
-    _extras = ["test", *extras]
+    extras_ = ["test", *extras]
     if "--cov" in posargs:
-        _extras.append("coverage")
+        extras_.append("coverage")
         posargs.append("--cov-config=pyproject.toml")
 
     session.install(*BUILD_REQUIREMENTS, *install_args, env=env)
-    install_arg = f"-ve.[{','.join(_extras)}]"
+    install_arg = f"-ve.[{','.join(extras_)}]"
     session.install("--no-build-isolation", install_arg, *install_args, env=env)
     session.run("pytest", *run_args, *posargs, env=env)
 

pyproject.toml

@@ -154,6 +154,10 @@ filterwarnings = [
   'ignore:.*qiskit\.providers\.models.* is deprecated.*:DeprecationWarning:mqt.qmap.*',
   'ignore:.*qiskit\.providers\.fake_provider\.fake_backend\.FakeBackend.* is deprecated.*:DeprecationWarning:',
   'ignore:.*qiskit\.providers\.backend.BackendV1.* is deprecated.*:DeprecationWarning:',
+  # Qiskit 1.3 deprecations
+  'ignore:.*``qiskit.dagcircuit.dagcircuit.DAGCircuit.*`` is deprecated as of qiskit 1.3.0.*:DeprecationWarning:',
+  'ignore:.*``qiskit.circuit.instruction.Instruction.condition`` is deprecated as of qiskit 1.3.0.*:DeprecationWarning:',
+  'ignore:.*``qiskit.circuit.library.standard_gates.x.*`` is pending deprecation as of qiskit 1.3.*:PendingDeprecationWarning:',
 ]
 
 [tool.coverage]
@@ -230,20 +234,17 @@ extend-select = [
     "SLOT",        # flake8-slots
     "SIM",         # flake8-simplify
     "T20",         # flake8-print
-    "TCH",         # flake8-type-checking
+    "TC",          # flake8-type-checking
     "TID251",      # flake8-tidy-imports.banned-api
     "TRY",         # tryceratops
     "UP",          # pyupgrade
     "YTT",         # flake8-2020
 ]
 ignore = [
-    "ANN101",  # Missing type annotation for `self` in method
-    "ANN102",  # Missing type annotation for `cls` in classmethod
     "ISC001",  # Conflicts with formatter
     "PLR09",   # Too many <...>
     "PLR2004", # Magic value used in comparison
     "PLC0415", # Import should be at top of file
-    "PT004",   # Incorrect, just usefixtures instead.
     "S101",    # Use of assert detected
     "S403",    # `pickle`, `cPickle`, `dill`, and `shelve` modules are possibly insecure
 ]
@@ -307,7 +308,7 @@ archs = "auto64"
 test-command = "python -c \"from mqt import qmap\""
 test-skip = ["cp313*"] # skip testing on Python 3.13 until our dependencies are ready
 build-frontend = "build[uv]"
-free-threaded-support = true
+enable = ["cpython-freethreading"]
 manylinux-x86_64-image = "manylinux_2_28"
 manylinux-aarch64-image = "manylinux_2_28"
 manylinux-ppc64le-image = "manylinux_2_28"