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fixed typo in usage
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src/trim_paired.c

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -42,7 +42,7 @@ void paired_usage(int status) {
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PROGRAM_NAME);
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fprintf(stderr, "\nIf you have one file with interleaved forward and reverse reads...\n");
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fprintf(stderr, "\nUsage: %s pe -c <combined input file> -t <quality type> -m <combined trimmed output> -s <trimmed singles file>\n", PROGRAM_NAME);
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fprintf(stderr, "\n Options:\n\
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fprintf(stderr, "\nOptions:\n\
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-t, --qual-type, Type of quality values (solexa (CASAVA < 1.3), illumina (CASAVA 1.3 to 1.7), sanger (which is CASAVA >= 1.8)) (required)\n\
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-f, --pe-file1, Input paired-end fastq file 1 (optional, must have same number of records as pe2)\n\
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-r, --pe-file2, Input paired-end fastq file 2 (optional, must have same number of records as pe1)\n\

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