Describe the bug
Post-processing workflow fails on run folder created by main workflow that was started with a run sheet rather than an accession number.
To Reproduce
Steps to reproduce the behavior:
- Run NF_RCP 2.0.0 main workflow with
--runsheet_path </path/to/runsheet> as in Approach 3 in README.md
- Run NF_RCP 2.0.0 post processing workflow using
-entry POST_PROCESSING
Expected behavior
The post-processing workflow should be able to find the runsheet path based on the runsheet_path parameter
Additional context
- Assay: bulkRNASeq
- Workflow: NF_RCP
- Workflow version: 2.0.0