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1 | 1 | # Configuration |
2 | 2 |
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3 | | -Launch the configuration module and GUI (ConfigWindow.py) from the Main window by selecting/editing a configuration file |
4 | | - or creating a new one. This file will be instrument-suite-specific, and is also deployment-specific according to which |
5 | | - factory calibration files are needed, as well as how the instrument was configured on the platform or ship. |
6 | | - Some cruises (e.g. moving between significantly different water types) may also require multiple configurations to |
7 | | - obtain the highest quality ocean color products at Level 2. Sharp gradients in environmental conditions could also |
8 | | - warrant multiple configurations for the same cruise (e.g. sharp changes in air temperature may effect how data |
9 | | - deglitching is parameterized, as described [below](README_deglitching.md)). |
| 3 | +Launch the configuration window from the Main window by selecting/editting a configuration file |
| 4 | + or creating a new one. This configuration is sensor/platform specific and deployment-specific according to which |
| 5 | + factory calibration files are needed, as well as how the instrument was configured on the platform. |
10 | 6 |
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11 | | -The configuration window looks like this: |
| 7 | +The configuration window should look like this: |
12 | 8 |
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13 | 9 | <center><img src="Data/Img/Configuration_window.png" alt="banner"></center> |
14 | 10 |
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15 | | -## Calibration & Instrument Files |
| 11 | +# Contents |
| 12 | +### [Calibration/Instrument Setup](#calibration-and-instrument-files) |
| 13 | +### [Level 0](#level-0-raw-files) |
| 14 | +### [Level 1A](#level-1a) |
| 15 | +### [Level 1AQC](#level-1aqc) |
| 16 | +### [Level 1B](#level-1b) |
| 17 | +### [Level 1BQC](#level-1bqc) |
| 18 | +### [Level 2](#level-2) |
| 19 | +### [SeaBASS/OCDB Output](#1-seabassocdb-file-and-header) |
| 20 | +### [PDF Reports](#2-pdf-reports) |
| 21 | + |
| 22 | + |
| 23 | + |
| 24 | +## Calibration and Instrument Files |
16 | 25 |
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17 | 26 | ***NOTE: IT IS IMPORTANT THAT THESE INSTRUCTIONS FOR SELECTING AND ACTIVATING CALIBRATION AND INSTRUMENT FILES ARE |
18 | 27 | FOLLOWED CAREFULLY OR PROCESSING WILL FAIL*** |
@@ -371,7 +380,7 @@ Individual spectra may be filtered out for: |
371 | 380 | document to see recommended QC screening in the frame of [FRM4SOC-2](https://frm4soc2.eumetsat.int/). |
372 | 381 |
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373 | 382 |
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374 | | -## L2 Processing |
| 383 | +## Level 2 Processing |
375 | 384 |
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376 | 385 | Data are averaged within optional time interval ensembles prior to calculating the remote sensing |
377 | 386 | reflectance within each ensemble. A typical field collection file for the SunTracker is one hour, and the |
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