Merge pull request #258 from neo4j/seperate-dependency-groups

Fix tutorial links + move dev deps to dependency groups

Author: FlorentinD

.github/workflows/code-style.yml

@@ -33,7 +33,7 @@ jobs:
           python-version: "3.11"
           enable-cache: true
       - run: uv venv
-      - run: uv pip install ".[dev, pandas, gds, snowflake]"
+      - run: uv sync --group dev --extra pandas --extra gds --extra snowflake
 
       - name: Check code style
         run: source .venv/bin/activate && cd ${GITHUB_WORKSPACE} && ./scripts/checkstyle.sh

.github/workflows/gds-integration-tests.yml

@@ -33,7 +33,7 @@ jobs:
         with:
           python-version: "3.11"
           enable-cache: true
-      - run: uv sync --extra dev --extra pandas --extra neo4j --extra gds --extra snowflake
+      - run: uv sync --group dev --extra pandas --extra neo4j --extra gds --extra snowflake
 
       - name: Run tests
         env:

.github/workflows/render-docs.yml

@@ -33,12 +33,12 @@ jobs:
         with:
           python-version: "3.11"
           enable-cache: true
-      - run: uv sync --extra dev --extra pandas --extra neo4j --extra gds --extra snowflake --extra docs
+      - run: uv sync --group dev --group docs --extra pandas --extra neo4j --extra gds --extra snowflake
 
       - name: Setup pandoc
         uses: pandoc/actions/setup@v1
         with:
           version: 3.6.2
 
       - name: Render ref docs
-        run: uv run bash ../scripts/render_docs.sh
+        run: uv run bash ../scripts/render_api_docs.sh

.github/workflows/snowflake-integration-tests.yml

@@ -34,7 +34,7 @@ jobs:
         with:
           python-version: "3.11"
           enable-cache: true
-      - run: uv sync --extra dev --extra pandas --extra snowflake
+      - run: uv sync --group dev --extra pandas --extra snowflake
 
       - name: Run tests
         env:

.github/workflows/unit-tests.yml

@@ -38,7 +38,7 @@ jobs:
         with:
           python-version: ${{ matrix.python-version }}
           enable-cache: true
-      - run: uv sync --extra dev --extra pandas --extra neo4j --extra gds --extra snowflake
+      - run: uv sync --group dev --extra pandas --extra neo4j --extra gds --extra snowflake
 
       - name: Run tests
         run: uv run pytest tests/

docs/antora/modules/ROOT/pages/integration/gds.adoc

@@ -53,4 +53,4 @@ VG = from_gds(
 VG.color_nodes(property="componentId")
 ----
 
-See the link:/tutorials/gds-example[Visualizing Neo4j Graph Data Science (GDS) Graphs tutorial] for a more extensive example.
+See the link:{tutorials-docs-uri}/gds-example[Visualizing Neo4j Graph Data Science (GDS) Graphs tutorial] for a more extensive example.

docs/antora/modules/ROOT/pages/integration/neo4j.adoc

@@ -42,4 +42,4 @@ with GraphDatabase.driver(URI, auth=auth) as driver:
 VG = from_neo4j(result)
 ----
 
-See the link:/tutorials/neo4j-example[Visualizing Neo4j Graphs tutorial] for a more extensive example.
+See the link:{tutorials-docs-uri}/neo4j-example[Visualizing Neo4j Graphs tutorial] for a more extensive example.

docs/antora/modules/ROOT/pages/integration/snowflake.adoc

@@ -84,4 +84,4 @@ VG = from_snowflake(
 )
 ----
 
-For a full example of the `from_snowflake` importer in action, please see the link:http://localhost:9000/tutorials/snowflake-example/[Visualizing Snowflake Tables tutorial].
+For a full example of the `from_snowflake` importer in action, please see the link:{tutorials-docs-uri}/snowflake-example/[Visualizing Snowflake Tables tutorial].

python-wrapper/pyproject.toml

@@ -39,6 +39,13 @@ requires-python = ">=3.10"
 
 
 [project.optional-dependencies]
+pandas = ["pandas>=2, <3", "pandas-stubs>=2, <3"]
+gds = ["graphdatascience>=1, <2"]
+neo4j = ["neo4j"]
+snowflake = ["snowflake-snowpark-python>=1, <2"]
+
+
+[dependency-groups]
 dev = [
     "ruff==0.14.1",
     "mypy==1.18.2",
@@ -57,10 +64,6 @@ docs = [
     "nbsphinx==0.9.7",
     "nbsphinx-link==1.3.1",
 ]
-pandas = ["pandas>=2, <3", "pandas-stubs>=2, <3"]
-gds = ["graphdatascience>=1, <2"]
-neo4j = ["neo4j"]
-snowflake = ["snowflake-snowpark-python>=1, <2"]
 notebook = [
     "ipykernel>=6.29.5",
     "pykernel>=0.1.6",

python-wrapper/src/neo4j_viz/pandas.py

@@ -69,6 +69,9 @@ def _parse_nodes(node_dfs: DFS_TYPE, dropna: bool = False) -> list[Node]:
             mandatory_fields = {}
             properties = {}
             for key, value in row.to_dict().items():
+                if not isinstance(key, str):
+                    key = str(key)
+
                 if key in basic_node_fields_aliases:
                     mandatory_fields[key] = value
                 else:
@@ -98,6 +101,9 @@ def _parse_relationships(rel_dfs: DFS_TYPE, dropna: bool = False) -> list[Relati
             mandatory_fields = {}
             properties = {}
             for key, value in row.to_dict().items():
+                if not isinstance(key, str):
+                    key = str(key)
+
                 if key in basic_rel_field_aliases:
                     mandatory_fields[key] = value
                 else: