Create Docker Image for scKirby

[Al-Murphy]

Hey,

Myself and Maria have had issues installing scKirby using conda on the HPC (installing from github after installing all dependencies from it on conda). Might be worthwhile creating a docker image for it? Or if you have a method to use it with conda that would be great to know either.

Thanks!

[Al-Murphy]

This approach is what I made for scflow and might be useful: https://stackoverflow.com/questions/67518331/importing-r-cran-bioconductor-and-github-r-packages-in-one-dockerfile. Also Eugene is working on creating a docker image for another package at the minute too

[bschilder]

Great idea, @Al-Murphy ! Once I start working on getting scKirby up to Bioc standards, I'll add the container as well. I can see how it'd be tricky to install since it involves so many different deps in both Python and R.