add tests for easy debugging

Author: hvgazula

.gitignore

@@ -2,3 +2,7 @@
 __pycache__
 data
 output
+
+1.2.0/logs
+1.2.0/trash
+

1.2.0/tests/configs/brainy_01.yml

@@ -0,0 +1,17 @@
+[basic]
+    debug: True
+    model_name: "test_brainy_01"
+    seed: 42
+    n_classes: 2
+    normalize: True
+    volume_shape: (256, 256, 256)
+    block_shape: (128, 128, 128)
+
+[train]
+    n_epochs: 2
+    save_freq: "epoch"
+
+[validation]
+
+[test]
+    n_samples: 1

1.2.0/tests/configs/brainy_02.yml

@@ -0,0 +1,17 @@
+[basic]
+    debug: True
+    model_name: "test_brainy_02"
+    seed: 42
+    n_classes: 6
+    normalize: True
+    volume_shape: (256, 256, 256)
+    block_shape: (128, 128, 128)
+
+[train]
+    n_epochs: 2
+    save_freq: "epoch"
+
+[validation]
+
+[test]
+    n_samples: 1

1.2.0/tests/configs/brainy_03.yml

@@ -0,0 +1,17 @@
+[basic]
+    debug: True
+    model_name: "test_brainy_03"
+    seed: 42
+    n_classes: 50
+    normalize: True
+    volume_shape: (256, 256, 256)
+    block_shape: (128, 128, 128)
+
+[train]
+    n_epochs: 2
+    save_freq: "epoch"
+
+[validation]
+
+[test]
+    n_samples: 1

1.2.0/tests/configs/kwyk_01.yml

@@ -0,0 +1,17 @@
+[basic]
+    debug: True
+    model_name: "test_kwyk_01"
+    seed: 42
+    n_classes: 2
+    normalize: False
+    volume_shape: (256, 256, 256)
+    block_shape: (32, 32, 32)
+
+[train]
+    n_epochs: 2
+    save_freq: "epoch"
+
+[validation]
+
+[test]
+    n_samples: 1

1.2.0/tests/configs/kwyk_02.yml

@@ -0,0 +1,17 @@
+[basic]
+    debug: True
+    model_name: "test_kwyk_02"
+    seed: 42
+    n_classes: 2
+    normalize: False
+    volume_shape: (256, 256, 256)
+    block_shape: (32, 32, 32)
+
+[train]
+    n_epochs: 2
+    save_freq: "epoch"
+
+[validation]
+
+[test]
+    n_samples: 1

1.2.0/tests/configs/kwyk_03.yml

@@ -0,0 +1,17 @@
+[basic]
+    debug: True
+    model_name: "test_kwyk_03"
+    seed: 42
+    n_classes: 2
+    normalize: False
+    volume_shape: (256, 256, 256)
+    block_shape: (32, 32, 32)
+
+[train]
+    n_epochs: 2
+    save_freq: "epoch"
+
+[validation]
+
+[test]
+    n_samples: 1

1.2.0/tests/test.sh

@@ -0,0 +1,8 @@
+#!/bin/bash -l
+python brainy_train.py tests/configs/brainy_01.yml
+python brainy_train.py tests/configs/brainy_02.yml
+python brainy_train.py tests/configs/brainy_03.yml
+
+python kwyk_train.py tests/configs/kwyk_01.yml
+python kwyk_train.py tests/configs/kwyk_02.yml
+python kwyk_train.py tests/configs/kwyk_03.yml