Deprecating power calculation test

Author: fabriciocravo

atlas_storage/test_hcp_fc_atlas.mat

@@ -67,7 +67,7 @@
 
 
 %% List of subjects per subset
-Params.list_of_nsubset = {250, 500, 1000, 200-}; % To change this, add more when necessary
+Params.list_of_nsubset = {250, 500, 1000, 2000}; % To change this, add more when necessary
                     % size of subset is full group size (N=n*2 for two sample t-test or N=n for one-sample)
 
                             % Current model (see above design matrix) only designed for t-test

config_files/setparams.m

@@ -50,7 +50,8 @@
 data_inference_from_contrast_test()
 
 %% Test power calculator
-test_power_calculation_from_gt_and_data()
+% I am going to depracate this power test
+% test_power_calculation_from_gt_and_data()
 
 %% Create t2-test dataset 
 create_t2_test_dataset()

power_calculator_test_script.m

@@ -1,6 +1,6 @@
 function [edge_level_stats_mean, network_level_stats_mean, edge_level_stats_std, network_level_stats_std] = ...
     calculate_edge_stats(file_type, rep_data)
-
+    
     switch file_type
 
         case 'full_file'

power_calculator_tools/calculate_edge_stats.m

@@ -5,7 +5,7 @@
         task_name = meta_data.study_name;
         return;
     end
-    
+
     % Legacy meta_data
     if isfield(meta_data, 'test_components')
 

power_calculator_tools/get_test_components_from_meta_data.m

@@ -1,7 +1,7 @@
 function file_name = name_file_from_meta_data(meta_data, gt)
 
     data_set_name = strcat(meta_data.dataset, '_', meta_data.map);
-    test_name = get_test_components_from_meta_data(meta_data.test_components);
+    test_name = get_test_components_from_meta_data(meta_data);
 
     [~, file_name] = create_and_check_rep_file(NaN, data_set_name, test_name, ...
         meta_data.test, meta_data.subject_number, meta_data.testing_code, gt);