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InstalledModule.groovy
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89 lines (79 loc) · 2.58 KB
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/*
* Copyright 2013-2026, Seqera Labs
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package nextflow.module
import groovy.transform.CompileStatic
import groovy.transform.ToString
import groovy.util.logging.Slf4j
import io.seqera.npr.api.schema.v1.ModuleMetadata
import org.yaml.snakeyaml.Yaml
import java.nio.file.Files
import java.nio.file.Path
/**
* Represents a module installed in the local modules/ directory
*
* @author Jorge Ejarque <jorge.ejarque@seqera.io>
*/
@Slf4j
@CompileStatic
@ToString(includeNames = true)
class InstalledModule {
ModuleReference reference
Path directory
Path mainFile
Path manifestFile
Path moduleInfoFile
String installedVersion
String expectedChecksum
/**
* Get the integrity status of this installed module
*
* @return ModuleIntegrity status
*/
ModuleIntegrity getIntegrity() {
// Check if main.nf exists
if( !Files.exists(mainFile) || !Files.exists(manifestFile) ) {
return ModuleIntegrity.CORRUPTED
}
// Check if .module-info file exists
if( !Files.exists(moduleInfoFile) ) {
return ModuleIntegrity.NO_REMOTE_MODULE
}
try {
// Compute actual checksum
def actualChecksum = ModuleChecksum.compute(directory)
// Compare with expected
if( actualChecksum == expectedChecksum ) {
return ModuleIntegrity.VALID
} else {
log.debug("Actual: $actualChecksum, expected: $expectedChecksum")
return ModuleIntegrity.MODIFIED
}
} catch( Exception e ) {
log.warn "Failed to compute checksum for module ${reference}: ${e.message}"
return ModuleIntegrity.CORRUPTED
}
}
}
/**
* Module integrity status
*/
@CompileStatic
enum ModuleIntegrity {
VALID, // Checksum matches
MODIFIED, // Checksum mismatch (local changes)
NO_REMOTE_MODULE, // No .module-info file (local-only module, no registry origin)
CORRUPTED // Missing required files
}