How to merge multiple grouped output files #2138
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zillurbmb51
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Hi, I have a process that outputs multiple files as tuple. Like this:
[chr1,[[chr1.chunk1.bgen],[chr1.chunk2.bgen],[chr1.chunk3.bgen],[chr1.chunk1.stat],[chr1.chunk2.stat],[chr1.chunk3.stat]]]
The process that gave me those chunks is:
How could I get
chr1.merged.bgen
andchr1.merged.stat
. I want to usecat
to merge all these chunks.I tried:
But got "
Input tuple does not match input set cardinality decalred
I also tried to use
imputed.collect()
andimputed.toList()
But got same error.Any help?
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