Nextflow on SGE

[tanyasarkjain]

Im trying to run a .nf script on my SGE cluster. I've created a folder with the bin folder that contains the nextflow executable, and added the path to my bashrc file . running the executable directly works fine, but when creating a config file in the directory with my script, and setting executor = 'sge' in the file, im finding the job won't run - gets stuck on

[pditommaso]

I'd suggest to check the status of SGE jobs in your queue

[tanyasarkjain]

It doesn't seem to be getting submitted to the queue at all