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FATAL: container creation failed with singularity profile #3913

@nhhaidee

Description

@nhhaidee

Bug report

Can not run pipeline with singularity profile

Expected behavior and actual behavior

Run pipeline (https://github.com/CFIA-NCFAD/nf-flu) with singularity profile but it failed with error

Steps to reproduce the problem

Run pipeline with -profile singularity

Program output

Command error: FATAL: container creation failed: mount /proc/self/fd/3->/usr/local/var/singularity/mnt/session/rootfs error: while mounting image /proc/self/fd/3: failed to find loop device: could not attach image file to loop device: no loop devices available

Environment

  • Nextflow version: 23.04.1.5866
  • Java version: openjdk 11.0.9.1-internal 2020-11-04
  • Operating system: Ubuntu 22.04
  • Bash version: 5.1.16(1)-release (x86_64-pc-linux-gnu)

Additional context

There is no problem with Docker profile

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