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Description
Bug report
Can not run pipeline with singularity profile
Expected behavior and actual behavior
Run pipeline (https://github.com/CFIA-NCFAD/nf-flu) with singularity profile but it failed with error
Steps to reproduce the problem
Run pipeline with -profile singularity
Program output
Command error: FATAL: container creation failed: mount /proc/self/fd/3->/usr/local/var/singularity/mnt/session/rootfs error: while mounting image /proc/self/fd/3: failed to find loop device: could not attach image file to loop device: no loop devices available
Environment
- Nextflow version: 23.04.1.5866
- Java version: openjdk 11.0.9.1-internal 2020-11-04
- Operating system: Ubuntu 22.04
- Bash version: 5.1.16(1)-release (x86_64-pc-linux-gnu)
Additional context
There is no problem with Docker profile
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