From cbac68935433eb2d5d62f311eef70e6cc9838e82 Mon Sep 17 00:00:00 2001
From: Cristian Goina <goinac@janelia.hhmi.org>
Date: Tue, 10 Feb 2026 12:42:10 -0500
Subject: [PATCH] use bkill -d to mark the LSF job as done

Signed-off-by: Cristian Goina <goinac@janelia.hhmi.org>
---
 .../src/main/groovy/nextflow/executor/LsfExecutor.groovy        | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/modules/nextflow/src/main/groovy/nextflow/executor/LsfExecutor.groovy b/modules/nextflow/src/main/groovy/nextflow/executor/LsfExecutor.groovy
index d7e705a5e5..c95fbc3dde 100644
--- a/modules/nextflow/src/main/groovy/nextflow/executor/LsfExecutor.groovy
+++ b/modules/nextflow/src/main/groovy/nextflow/executor/LsfExecutor.groovy
@@ -189,7 +189,7 @@ class LsfExecutor extends AbstractGridExecutor implements TaskArrayExecutor {
     }
 
     @Override
-    protected List<String> getKillCommand() { ['bkill'] }
+    protected List<String> getKillCommand() { ['bkill', '-d'] }
 
     @Override
     protected List<String> queueStatusCommand( queue ) {