fix documentation links

Author: nvnieuwk

docs/contributing/setup.md

@@ -66,7 +66,7 @@ To preview the docs, open the URL provided by mkdocs in your browser.
    - `github_username`: The GitHub username granting access to the plugin repository.
    - `github_access_token`: The GitHub access token required to upload and commit changes to the plugin repository.
    - `github_commit_email`: The email address associated with your GitHub account.
-3. Update the [changelog](./CHANGELOG.md).
+3. Update the [changelog](https://github.com/nextflow-io/nf-schema/blob/master/CHANGELOG.md).
 4. Build and publish the plugin to your GitHub repository:
    ```bash
    make release

docs/index.md

@@ -15,8 +15,8 @@ description: Nextflow plugin for sample sheet validation
 
     nf-schema is the new version of the now deprecated [nf-validation](https://github.com/nextflow-io/nf-validation). Please follow the [migration guide](https://nextflow-io.github.io/nf-schema/latest/migration_guide/) to migrate your code to this new version.
 
-[Parameter schema specs](nextflow_schema/nextflow_schema_specification/){ .md-button .md-button--primary }
-[Sample sheet schema specs](nextflow_schema/sample_sheet_schema_specification/){ .md-button }
+[Parameter schema specs](nextflow_schema/nextflow_schema_specification.md){ .md-button .md-button--primary }
+[Sample sheet schema specs](nextflow_schema/sample_sheet_schema_specification.md){ .md-button }
 
 ## Introduction
 

docs/nextflow_schema/nextflow_schema_examples.md

@@ -13,10 +13,10 @@ It is used as a test fixture in the nf-schema package [here](https://github.com/
 
 !!! note
 
-    More examples can be found in the plugin [`testResources` directory](https://github.com/nextflow-io/nf-schema/master/plugins/nf-schema/testResources/).
+    More examples can be found in the plugin [`testResources` directory](https://github.com/nextflow-io/nf-schema/tree/master/src/testResources).
 
 ```json
 --8<-- "src/testResources/nextflow_schema.json"
 ```
 
-Even more examples can be found in the plugin [`examples` directory](../../examples) in the GitHub repository.
+Even more examples can be found in the plugin [`examples` directory](https://github.com/nextflow-io/nf-schema/tree/master/examples) in the GitHub repository.

docs/nextflow_schema/sample_sheet_schema_examples.md

@@ -63,4 +63,4 @@ It is used as a test fixture in the nf-schema package [here](https://github.com/
 --8<-- "src/testResources/schema_input.json"
 ```
 
-Even more examples can be found in the plugin [`examples` directory](../../examples) in the GitHub repository.
+Even more examples can be found in the plugin [`examples` directory](https://github.com/nextflow-io/nf-schema/tree/master/examples) in the GitHub repository.