refactor: Clean up integration test structure

Signed-off-by: Edmund Miller <[email protected]>

Author: edmundmiller

README.md

@@ -239,28 +239,3 @@ The `CSVREAD` function provided by the H2 database engine allows you to query an
 Like all dataflow operators in Nextflow, the operators provided by this plugin are executed asynchronously.
 
 In particular, data inserted using the `sqlInsert` operator is _not_ guaranteed to be available to any subsequent queries using the `fromQuery` operator, as it is not possible to make a channel factory operation dependent on some upstream operation.
-
-## Running Integration Tests
-
-To run the integration tests, you'll need to set up the following environment variables:
-
-### Databricks Integration Tests
-
-For Databricks integration tests, you need to set:
-
-```bash
-export DATABRICKS_JDBC_URL="jdbc:databricks://<workspace-url>:443/default;transportMode=http;ssl=1;httpPath=sql/protocolv1/o/<org-id>/<workspace-id>"
-export DATABRICKS_TOKEN="<your-databricks-token>"
-```
-
-You can get these values from your Databricks workspace:
-1. The JDBC URL can be found in the Databricks SQL endpoint connection details
-2. The token can be generated from your Databricks user settings
-
-After setting up the required environment variables, you can run the integration tests using:
-
-```bash
-./gradlew test
-```
-
-<!-- Note: Integration tests are skipped by default when running in smoke test mode (when `NXF_SMOKE` environment variable is set). -->

docs/databricks.md

@@ -0,0 +1,27 @@
+# Databricks integration
+
+## Running Integration Tests
+
+To run the integration tests, you'll need to set up the following environment variables:
+
+### Databricks Integration Tests
+
+For Databricks integration tests, you need to set:
+
+```bash
+export DATABRICKS_JDBC_URL="jdbc:databricks://<workspace-url>:443/default;transportMode=http;ssl=1;httpPath=sql/protocolv1/o/<org-id>/<workspace-id>"
+export DATABRICKS_TOKEN="<your-databricks-token>"
+```
+
+You can get these values from your Databricks workspace:
+
+1. The JDBC URL can be found in the Databricks SQL endpoint connection details
+2. The token can be generated from your Databricks user settings
+
+After setting up the required environment variables, you can run the integration tests using:
+
+```bash
+./gradlew test
+```
+
+<!-- Note: Integration tests are skipped by default when running in smoke test mode (when `NXF_SMOKE` environment variable is set). -->

plugins/nf-sqldb/src/test/groovy/nextflow/sql/SqlPluginIntegrationTest.groovy renamed to plugins/nf-sqldb/src/test/nextflow/sql/SqlPluginIntegrationTest.groovy

@@ -29,7 +29,7 @@ class SqlPluginIntegrationTest extends Specification {
         given:
         // Ensure test resources directory exists
         def testDir = Paths.get('plugins/nf-sqldb/src/testResources/testDir').toAbsolutePath()
-        def scriptPath = testDir.resolve('test_sql_db.nf')
+        def scriptPath = testDir.resolve('main.nf')
         def configPath = testDir.resolve('nextflow.config')
 
         // Check if required files exist