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docs/hello_nextflow/03_hello_containers.md

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@@ -240,7 +240,10 @@ After it has finished building, you can run the container image you just built.
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docker run --rm quote:latest quote "Margaret Oakley Dayhoff"
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```
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!Hint: Even if Seqera Containers doesn't manage to successfully build a container image for you, the `Dockerfile` and `conda.yml` are great starting point for a manual build.
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!!! Hint
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Even if Seqera Containers doesn't manage to successfully build a container image for you, the `Dockerfile` and `conda.yml` are great starting point for a manual build.
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It often only takes a few additional `RUN` commands added to the Dockerfile to add the missing dependencies or system libraries.
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### Takeaway
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Edit the `hello_containers.nf` script to add a `container` directive to the `cowsay` process.
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_Before_:\_
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_Before:_
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```groovy title="hello-containers.nf"
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process COW_SAY {
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nextflow run hello_containers.nf
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```
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!NOTE
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The `nextflow.config` in our current working directory contains `docker.enabled = true`, which tells Nextflow to use Docker to run processes.
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!!! NOTE
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The `nextflow.config` in our current working directory contains `docker.enabled = true`, which tells Nextflow to use Docker to run processes.
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Without that configuration we would have to specify the `-with-docker` flag when running the script.
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### 3.3. Check the results

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