Fix "halotype" typo in tests

rmzelle · web-flow · commit 846eacef59ef · 2025-03-10T10:13:22.000-04:00
diff --git a/nf4-science/genomics/solutions/modules/gatk/haplotypecaller/tests/main.nf.test b/nf4-science/genomics/solutions/modules/gatk/haplotypecaller/tests/main.nf.test
@@ -4,7 +4,7 @@ nextflow_process {
     script "../main.nf"
     process "GATK_HAPLOTYPECALLER"
 
-    test("Should call son's halotype correctly") {
+    test("Should call son's haplotype correctly") {
 
         setup {
             run("SAMTOOLS_INDEX") {
@@ -39,7 +39,7 @@ nextflow_process {
 
     }
 
-    test("Should call mother's halotype correctly") {
+    test("Should call mother's haplotype correctly") {
 
         setup {
             run("SAMTOOLS_INDEX") {
@@ -74,7 +74,7 @@ nextflow_process {
         }
     }
 
-    test("Should call father's halotype correctly") {
+    test("Should call father's haplotype correctly") {
 
         setup {
             run("SAMTOOLS_INDEX") {
diff --git a/nf4-science/genomics/solutions/modules/gatk/haplotypecaller/tests/main.nf.test.snap b/nf4-science/genomics/solutions/modules/gatk/haplotypecaller/tests/main.nf.test.snap
@@ -1,5 +1,5 @@
 {
-    "Should call son's halotype correctly": {
+    "Should call son's haplotype correctly": {
         "content": [
             {
                 "0": [

Original file line number	Diff line number	Diff line change
`@@ -4,7 +4,7 @@ nextflow_process {`
`4`	`4`	`script "../main.nf"`
`5`	`5`	`process "GATK_HAPLOTYPECALLER"`
`6`	`6`
`7`		`- test("Should call son's halotype correctly") {`
	`7`	`+ test("Should call son's haplotype correctly") {`
`8`	`8`
`9`	`9`	`setup {`
`10`	`10`	`run("SAMTOOLS_INDEX") {`
`@@ -39,7 +39,7 @@ nextflow_process {`
`39`	`39`
`40`	`40`	`}`
`41`	`41`
`42`		`- test("Should call mother's halotype correctly") {`
	`42`	`+ test("Should call mother's haplotype correctly") {`
`43`	`43`
`44`	`44`	`setup {`
`45`	`45`	`run("SAMTOOLS_INDEX") {`
`@@ -74,7 +74,7 @@ nextflow_process {`
`74`	`74`	`}`
`75`	`75`	`}`
`76`	`76`
`77`		`- test("Should call father's halotype correctly") {`
	`77`	`+ test("Should call father's haplotype correctly") {`
`78`	`78`
`79`	`79`	`setup {`
`80`	`80`	`run("SAMTOOLS_INDEX") {`
Original file line number	Diff line number	Diff line change
`@@ -1,5 +1,5 @@`
`1`	`1`	`{`
`2`		`- "Should call son's halotype correctly": {`
	`2`	`+ "Should call son's haplotype correctly": {`
`3`	`3`	`"content": [`
`4`	`4`	`{`
`5`	`5`	`"0": [`