@@ -524,7 +524,7 @@ test("Should run without failures") {
524524_ After:_
525525
526526``` groovy title="modules/gatk/haplotypecaller/tests/main.nf.test" linenums="7"
527- test("Should call son's halotype correctly") {
527+ test("Should call son's haplotype correctly") {
528528
529529 setup {
530530 run("SAMTOOLS_INDEX") {
@@ -575,9 +575,9 @@ https://www.nf-test.com
575575
576576Test Process GATK_HAPLOTYPECALLER
577577
578- Test [30247349] 'Should call son's halotype correctly' PASSED (20.002s)
578+ Test [30247349] 'Should call son's haplotype correctly' PASSED (20.002s)
579579 Snapshots:
580- 1 created [Should call son's halotype correctly]
580+ 1 created [Should call son's haplotype correctly]
581581
582582
583583Snapshot Summary:
@@ -606,7 +606,7 @@ https://www.nf-test.com
606606
607607Test Process GATK_HAPLOTYPECALLER
608608
609- Test [c847bfae] 'Should call son's halotype correctly' FAILED (19.979s)
609+ Test [c847bfae] 'Should call son's haplotype correctly' FAILED (19.979s)
610610
611611 java.lang.RuntimeException: Different Snapshot:
612612 [ [
@@ -695,7 +695,7 @@ https://www.nf-test.com
695695
696696Test Process GATK_HAPLOTYPECALLER
697697
698- Test [c847bfae] 'Should call son's halotype correctly' PASSED (19.33s)
698+ Test [c847bfae] 'Should call son's haplotype correctly' PASSED (19.33s)
699699
700700
701701SUCCESS: Executed 1 tests in 19.382s
@@ -741,7 +741,7 @@ Add similar tests for the mother and father samples:
741741 }
742742 }
743743
744- test("Should call father's halotype correctly") {
744+ test("Should call father's haplotype correctly") {
745745
746746 setup {
747747 run("SAMTOOLS_INDEX") {
@@ -793,9 +793,9 @@ https://www.nf-test.com
793793
794794Test Process GATK_HAPLOTYPECALLER
795795
796- Test [c847bfae] 'Should call son's halotype correctly' PASSED (19.91s)
797- Test [44494e9c] 'Should call mother's halotype correctly' PASSED (18.606s)
798- Test [eb0d1a07] 'Should call father's halotype correctly' PASSED (18.773s)
796+ Test [c847bfae] 'Should call son's haplotype correctly' PASSED (19.91s)
797+ Test [44494e9c] 'Should call mother's haplotype correctly' PASSED (18.606s)
798+ Test [eb0d1a07] 'Should call father's haplotype correctly' PASSED (18.773s)
799799
800800
801801SUCCESS: Executed 3 tests in 57.348s
@@ -1181,9 +1181,9 @@ https://www.nf-test.com
11811181
11821182Test Process GATK_HAPLOTYPECALLER
11831183
1184- Test [c847bfae] 'Should call son's halotype correctly' PASSED (20.951s)
1185- Test [44494e9c] 'Should call mother's halotype correctly' PASSED (19.155s)
1186- Test [eb0d1a07] 'Should call father's halotype correctly' PASSED (21.843s)
1184+ Test [c847bfae] 'Should call son's haplotype correctly' PASSED (20.951s)
1185+ Test [44494e9c] 'Should call mother's haplotype correctly' PASSED (19.155s)
1186+ Test [eb0d1a07] 'Should call father's haplotype correctly' PASSED (21.843s)
11871187
11881188Test Process GATK_JOINTGENOTYPING
11891189
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