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Copy file name to clipboardExpand all lines: docs/hello_nextflow/03_hello_workflow.md
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@@ -368,7 +368,7 @@ In theory this should handle any arbitrary number of input files.
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Some command-line tools require providing an argument (like `-input`) for each input file.
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In that case, we would have to do a little bit of extra work to compose the command.
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You can see an example of this in the [Nextflow for Genomics](../nf4_science/genomics/) training course.
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You can see an example of this in the [Nextflow for Genomics](../../nf4_science/genomics/) training course.
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<!--[ADD LINK to note above] -->
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@@ -536,7 +536,7 @@ This time we have all three greetings in the final output file. Success! Remove
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!!! note
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If you run this several times without `-resume`, you will see that the order of the greetings changes from one run to the next.
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This shows you that the order in which elements flow through process calls is not guaranteed to be consistent, unless you make use of fair threading (check the [fair](https://www.nextflow.io/docs/latest/reference/process.html#fair) directive).
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This shows you that the order in which elements flow through process calls is not guaranteed to be consistent.
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### Takeaway
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@@ -793,7 +793,7 @@ But as the saying goes, why not both?
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### 4.2. Report the output at the end of the workflow
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Now that we have two outputs coming out of the `collectGreetings` process, the `collectGreetings.out` output multi-channel contains two channels:
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Now that we have two outputs coming out of the `collectGreetings` process, the `collectGreetings.out` output contains two channels:
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-`collectGreetings.out.outfile` contains the final output file
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-`collectGreetings.out.count` contains the count of greetings
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