Remove _REP from id for posterior grouping

JoseEspinosa · JoseEspinosa · commit 0dc940825a05 · 2024-10-07T12:14:10.000+02:00
diff --git a/subworkflows/local/bed_consensus_quantify_qc_bedtools_featurecounts_deseq2.nf b/subworkflows/local/bed_consensus_quantify_qc_bedtools_featurecounts_deseq2.nf
@@ -30,7 +30,7 @@ workflow BED_CONSENSUS_QUANTIFY_QC_BEDTOOLS_FEATURECOUNTS_DESEQ2 {
     ch_peaks
         .map {
             meta, peak ->
-                [ meta.antibody, meta.id - ~/_T\d+$/, peak ]
+                [ meta.antibody, meta.id - ~/_REP\d+$/, peak ]
         }
         .groupTuple()
         .map {

Original file line number	Diff line number	Diff line change
`@@ -30,7 +30,7 @@ workflow BED_CONSENSUS_QUANTIFY_QC_BEDTOOLS_FEATURECOUNTS_DESEQ2 {`
`30`	`30`	`ch_peaks`
`31`	`31`	`.map {`
`32`	`32`	`meta, peak ->`
`33`		`- [ meta.antibody, meta.id - ~/_T\d+$/, peak ]`
	`33`	`+ [ meta.antibody, meta.id - ~/_REP\d+$/, peak ]`
`34`	`34`	`}`
`35`	`35`	`.groupTuple()`
`36`	`36`	`.map {`