Bump version 2.2.0dev

Author: JoseEspinosa

CHANGELOG.md

@@ -3,6 +3,29 @@
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## [[2.2.0dev] - [date]
+
+### Enhancements & fixes
+
+### Parameters
+
+| Old parameter | New parameter                    |
+| ------------- | -------------------------------- |
+|               |                                  |
+
+> **NB:** Parameter has been **updated** if both old and new parameter information is present.
+> **NB:** Parameter has been **added** if just the new parameter information is present.
+> **NB:** Parameter has been **removed** if parameter information isn't present.
+
+### Software dependencies
+
+Note, since the pipeline is now using Nextflow DSL2, each process will be run with its own [Biocontainer](https://biocontainers.pro/#/registry). This means that on occasion it is entirely possible for the pipeline to be using different versions of the same tool. However, the overall software dependency changes compared to the last release have been listed below for reference.
+
+| Dependency | Old version | New version |
+| ---------- | ----------- | ----------- |
+|            |             |             |
+|            |             |             |
+
 ## [[2.1.0](https://github.com/nf-core/chipseq/releases/tag/2.1.0)] - 2024-10-07
 
 ### Credits

assets/multiqc_config.yml

@@ -1,7 +1,7 @@
 report_comment: >
-  This report has been generated by the <a href="https://github.com/nf-core/chipseq/releases/tag/2.1.0" target="_blank">nf-core/chipseq</a>
+  This report has been generated by the <a href="https://github.com/nf-core/chipseq/tree/dev" target="_blank">nf-core/chipseq</a>
   analysis pipeline. For information about how to interpret these results, please see the
-  <a href="https://nf-co.re/chipseq/2.1.0/docs/output" target="_blank">documentation</a>.
+  <a href="https://nf-co.re/chipseq/dev/docs/output" target="_blank">documentation</a>.
 
 data_format: "yaml"
 

nextflow.config

@@ -291,7 +291,7 @@ manifest {
     description     = """ChIP-seq peak-calling and differential analysis pipeline."""
     mainScript      = 'main.nf'
     nextflowVersion = '!>=23.04.0'
-    version         = '2.1.0'
+    version         = '2.2.0dev'
     doi             = 'https://doi.org/10.5281/zenodo.3240506'
 }