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.travis.yml

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sudo: required
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language: java
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jdk: openjdk8
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services:
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- docker
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services: docker
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before_install:
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# Pull the docker image first so the test doesn't wait for this
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- docker pull nfcore/chipseq:latest
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before_install: docker pull nfcore/chipseq:latest
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install:
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# Install Nextflow
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- ''
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script:
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# Lint the pipeline code
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- "nf-core lint ${TRAVIS_BUILD_DIR}"
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# Run, build reference genome
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- nextflow run ${TRAVIS_BUILD_DIR} -profile test,docker
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# Basic run with supplied reference
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- nextflow run ${TRAVIS_BUILD_DIR} -profile test,docker --genome EF4
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# Lint the pipeline code
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- "nf-core lint ${TRAVIS_BUILD_DIR}"
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# Run, build reference genome
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- nextflow run ${TRAVIS_BUILD_DIR} -profile test,docker
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# Basic run with supplied reference
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- nextflow run ${TRAVIS_BUILD_DIR} -profile test,docker --genome EF4

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