@@ -1535,7 +1535,7 @@ workflow.onComplete {
15351535 // Set up the e-mail variables
15361536 def subject = " [nf-core/chipseq] Successful: $workflow . runName "
15371537 if (! workflow. success) {
1538- subject = " [nf-core/chipseq] FAILED: $workflow . runName "
1538+ subject = " [nf-core/chipseq] FAILED: $workflow . runName "
15391539 }
15401540 def email_fields = [:]
15411541 email_fields[' version' ] = workflow. manifest. version
@@ -1601,21 +1601,21 @@ workflow.onComplete {
16011601 // Send the HTML e-mail
16021602 if (email_address) {
16031603 try {
1604- if (params. plaintext_email) { throw GroovyException (' Send plaintext e-mail, not HTML' ) }
1605- // Try to send HTML e-mail using sendmail
1606- [ ' sendmail' , ' -t' ]. execute() << sendmail_html
1607- log. info " [nf-core/chipseq] Sent summary e-mail to $email_address (sendmail)"
1604+ if (params. plaintext_email) { throw GroovyException (' Send plaintext e-mail, not HTML' ) }
1605+ // Try to send HTML e-mail using sendmail
1606+ [ ' sendmail' , ' -t' ]. execute() << sendmail_html
1607+ log. info " [nf-core/chipseq] Sent summary e-mail to $email_address (sendmail)"
16081608 } catch (all) {
1609- // Catch failures and try with plaintext
1610- [ ' mail' , ' -s' , subject, email_address ]. execute() << email_txt
1611- log. info " [nf-core/chipseq] Sent summary e-mail to $email_address (mail)"
1609+ // Catch failures and try with plaintext
1610+ [ ' mail' , ' -s' , subject, email_address ]. execute() << email_txt
1611+ log. info " [nf-core/chipseq] Sent summary e-mail to $email_address (mail)"
16121612 }
16131613 }
16141614
16151615 // Write summary e-mail HTML to a file
16161616 def output_d = new File (" ${ params.outdir} /pipeline_info/" )
16171617 if (! output_d. exists()) {
1618- output_d. mkdirs()
1618+ output_d. mkdirs()
16191619 }
16201620 def output_hf = new File (output_d, " pipeline_report.html" )
16211621 output_hf. withWriter { w -> w << email_html }
@@ -1628,9 +1628,9 @@ workflow.onComplete {
16281628 c_red = params. monochrome_logs ? ' ' : " \0 33[0;31m" ;
16291629
16301630 if (workflow. stats. ignoredCount > 0 && workflow. success) {
1631- log. info " ${ c_purple} Warning, pipeline completed, but with errored process(es) ${ c_reset} "
1632- log. info " ${ c_red} Number of ignored errored process(es) : ${ workflow.stats.ignoredCount} ${ c_reset} "
1633- log. info " ${ c_green} Number of successfully ran process(es) : ${ workflow.stats.succeedCount} ${ c_reset} "
1631+ log. info " ${ c_purple} Warning, pipeline completed, but with errored process(es) ${ c_reset} "
1632+ log. info " ${ c_red} Number of ignored errored process(es) : ${ workflow.stats.ignoredCount} ${ c_reset} "
1633+ log. info " ${ c_green} Number of successfully ran process(es) : ${ workflow.stats.succeedCount} ${ c_reset} "
16341634 }
16351635
16361636 if (workflow. success) {
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