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1 parent 390b9d2 commit cb1e5ceCopy full SHA for cb1e5ce
.github/workflows/ci.yml
@@ -33,8 +33,6 @@ jobs:
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- "conda"
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- "docker"
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- "singularity"
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- test_profile:
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- - "test"
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test_name:
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- "test"
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- "skip_trimming"
@@ -99,5 +97,5 @@ jobs:
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- name: "Run pipeline with test data ${{ matrix.NXF_VER }} | ${{ matrix.test_name }} | ${{ matrix.profile }}"
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continue-on-error: ${{ matrix.NXF_VER == 'latest-everything' }}
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run: |
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- nextflow run ${GITHUB_WORKSPACE} -profile ${{ matrix.test_profile }},${{ matrix.profile }} --outdir ./results ${{ matrix.parameters }}
+ nextflow run ${GITHUB_WORKSPACE} -profile test,${{ matrix.profile }} --outdir ./results ${{ matrix.parameters }}
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if: "${{ github.base_ref == 'master' }}"
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