1+ {
2+ " -profile test" : {
3+ " content" : [
4+ 7 ,
5+ {
6+ " FASTQC" : {
7+ " fastqc" : " 0.12.1"
8+ },
9+ " SEQTK_TRIM" : {
10+ " seqtk" : " 1.4-r122"
11+ },
12+ " Workflow" : {
13+ " nf-core/demo" : " v1.0.2"
14+ }
15+ },
16+ [
17+ " fastqc" ,
18+ " fastqc/SAMPLE1_PE" ,
19+ " fastqc/SAMPLE1_PE/SAMPLE1_PE_1_fastqc.html" ,
20+ " fastqc/SAMPLE1_PE/SAMPLE1_PE_2_fastqc.html" ,
21+ " fastqc/SAMPLE2_PE" ,
22+ " fastqc/SAMPLE2_PE/SAMPLE2_PE_1_fastqc.html" ,
23+ " fastqc/SAMPLE2_PE/SAMPLE2_PE_2_fastqc.html" ,
24+ " fastqc/SAMPLE3_SE" ,
25+ " fastqc/SAMPLE3_SE/SAMPLE3_SE_1_fastqc.html" ,
26+ " fastqc/SAMPLE3_SE/SAMPLE3_SE_2_fastqc.html" ,
27+ " fq" ,
28+ " fq/SAMPLE1_PE" ,
29+ " fq/SAMPLE1_PE/SAMPLE1_PE_sample1_R1.fastq.gz" ,
30+ " fq/SAMPLE1_PE/SAMPLE1_PE_sample1_R2.fastq.gz" ,
31+ " fq/SAMPLE2_PE" ,
32+ " fq/SAMPLE2_PE/SAMPLE2_PE_sample2_R1.fastq.gz" ,
33+ " fq/SAMPLE2_PE/SAMPLE2_PE_sample2_R2.fastq.gz" ,
34+ " fq/SAMPLE3_SE" ,
35+ " fq/SAMPLE3_SE/SAMPLE3_SE_sample1_R1.fastq.gz" ,
36+ " fq/SAMPLE3_SE/SAMPLE3_SE_sample2_R1.fastq.gz" ,
37+ " multiqc" ,
38+ " multiqc/multiqc_data" ,
39+ " multiqc/multiqc_data/BETA-multiqc.parquet" ,
40+ " multiqc/multiqc_data/fastqc-status-check-heatmap.txt" ,
41+ " multiqc/multiqc_data/fastqc_overrepresented_sequences_plot.txt" ,
42+ " multiqc/multiqc_data/fastqc_per_base_n_content_plot.txt" ,
43+ " multiqc/multiqc_data/fastqc_per_base_sequence_quality_plot.txt" ,
44+ " multiqc/multiqc_data/fastqc_per_sequence_gc_content_plot_Counts.txt" ,
45+ " multiqc/multiqc_data/fastqc_per_sequence_gc_content_plot_Percentages.txt" ,
46+ " multiqc/multiqc_data/fastqc_per_sequence_quality_scores_plot.txt" ,
47+ " multiqc/multiqc_data/fastqc_sequence_counts_plot.txt" ,
48+ " multiqc/multiqc_data/fastqc_sequence_duplication_levels_plot.txt" ,
49+ " multiqc/multiqc_data/fastqc_sequence_length_distribution_plot.txt" ,
50+ " multiqc/multiqc_data/fastqc_top_overrepresented_sequences_table.txt" ,
51+ " multiqc/multiqc_data/multiqc.log" ,
52+ " multiqc/multiqc_data/multiqc_citations.txt" ,
53+ " multiqc/multiqc_data/multiqc_data.json" ,
54+ " multiqc/multiqc_data/multiqc_fastqc.txt" ,
55+ " multiqc/multiqc_data/multiqc_general_stats.txt" ,
56+ " multiqc/multiqc_data/multiqc_software_versions.txt" ,
57+ " multiqc/multiqc_data/multiqc_sources.txt" ,
58+ " multiqc/multiqc_plots" ,
59+ " multiqc/multiqc_plots/pdf" ,
60+ " multiqc/multiqc_plots/pdf/fastqc-status-check-heatmap.pdf" ,
61+ " multiqc/multiqc_plots/pdf/fastqc_overrepresented_sequences_plot.pdf" ,
62+ " multiqc/multiqc_plots/pdf/fastqc_per_base_n_content_plot.pdf" ,
63+ " multiqc/multiqc_plots/pdf/fastqc_per_base_sequence_quality_plot.pdf" ,
64+ " multiqc/multiqc_plots/pdf/fastqc_per_sequence_gc_content_plot_Counts.pdf" ,
65+ " multiqc/multiqc_plots/pdf/fastqc_per_sequence_gc_content_plot_Percentages.pdf" ,
66+ " multiqc/multiqc_plots/pdf/fastqc_per_sequence_quality_scores_plot.pdf" ,
67+ " multiqc/multiqc_plots/pdf/fastqc_sequence_counts_plot-cnt.pdf" ,
68+ " multiqc/multiqc_plots/pdf/fastqc_sequence_counts_plot-pct.pdf" ,
69+ " multiqc/multiqc_plots/pdf/fastqc_sequence_duplication_levels_plot.pdf" ,
70+ " multiqc/multiqc_plots/pdf/fastqc_sequence_length_distribution_plot.pdf" ,
71+ " multiqc/multiqc_plots/pdf/fastqc_top_overrepresented_sequences_table.pdf" ,
72+ " multiqc/multiqc_plots/png" ,
73+ " multiqc/multiqc_plots/png/fastqc-status-check-heatmap.png" ,
74+ " multiqc/multiqc_plots/png/fastqc_overrepresented_sequences_plot.png" ,
75+ " multiqc/multiqc_plots/png/fastqc_per_base_n_content_plot.png" ,
76+ " multiqc/multiqc_plots/png/fastqc_per_base_sequence_quality_plot.png" ,
77+ " multiqc/multiqc_plots/png/fastqc_per_sequence_gc_content_plot_Counts.png" ,
78+ " multiqc/multiqc_plots/png/fastqc_per_sequence_gc_content_plot_Percentages.png" ,
79+ " multiqc/multiqc_plots/png/fastqc_per_sequence_quality_scores_plot.png" ,
80+ " multiqc/multiqc_plots/png/fastqc_sequence_counts_plot-cnt.png" ,
81+ " multiqc/multiqc_plots/png/fastqc_sequence_counts_plot-pct.png" ,
82+ " multiqc/multiqc_plots/png/fastqc_sequence_duplication_levels_plot.png" ,
83+ " multiqc/multiqc_plots/png/fastqc_sequence_length_distribution_plot.png" ,
84+ " multiqc/multiqc_plots/png/fastqc_top_overrepresented_sequences_table.png" ,
85+ " multiqc/multiqc_plots/svg" ,
86+ " multiqc/multiqc_plots/svg/fastqc-status-check-heatmap.svg" ,
87+ " multiqc/multiqc_plots/svg/fastqc_overrepresented_sequences_plot.svg" ,
88+ " multiqc/multiqc_plots/svg/fastqc_per_base_n_content_plot.svg" ,
89+ " multiqc/multiqc_plots/svg/fastqc_per_base_sequence_quality_plot.svg" ,
90+ " multiqc/multiqc_plots/svg/fastqc_per_sequence_gc_content_plot_Counts.svg" ,
91+ " multiqc/multiqc_plots/svg/fastqc_per_sequence_gc_content_plot_Percentages.svg" ,
92+ " multiqc/multiqc_plots/svg/fastqc_per_sequence_quality_scores_plot.svg" ,
93+ " multiqc/multiqc_plots/svg/fastqc_sequence_counts_plot-cnt.svg" ,
94+ " multiqc/multiqc_plots/svg/fastqc_sequence_counts_plot-pct.svg" ,
95+ " multiqc/multiqc_plots/svg/fastqc_sequence_duplication_levels_plot.svg" ,
96+ " multiqc/multiqc_plots/svg/fastqc_sequence_length_distribution_plot.svg" ,
97+ " multiqc/multiqc_plots/svg/fastqc_top_overrepresented_sequences_table.svg" ,
98+ " multiqc/multiqc_report.html" ,
99+ " pipeline_info" ,
100+ " pipeline_info/nf_core_demo_software_mqc_versions.yml"
101+ ],
102+ [
103+ " SAMPLE1_PE_sample1_R1.fastq.gz:md5,7dd2fd0d542d9259d9aed53550907fae" ,
104+ " SAMPLE1_PE_sample1_R2.fastq.gz:md5,1995fe8488384d801807805f26ceca8a" ,
105+ " SAMPLE2_PE_sample2_R1.fastq.gz:md5,05dba9c26396cbdbe0e6da26f037106e" ,
106+ " SAMPLE2_PE_sample2_R2.fastq.gz:md5,63d5e4ac37927c2ecec4b74d2ff99a10" ,
107+ " SAMPLE3_SE_sample1_R1.fastq.gz:md5,7dd2fd0d542d9259d9aed53550907fae" ,
108+ " SAMPLE3_SE_sample2_R1.fastq.gz:md5,05dba9c26396cbdbe0e6da26f037106e" ,
109+ " fastqc-status-check-heatmap.txt:md5,0f1975c565a16bf09be08a05c204ded7" ,
110+ " fastqc_overrepresented_sequences_plot.txt:md5,4b23cea39c4e23deef6b97810bc1ee46" ,
111+ " fastqc_per_base_n_content_plot.txt:md5,037692101c0130c72493d3bbfa3afac1" ,
112+ " fastqc_per_base_sequence_quality_plot.txt:md5,bfe735f3e31befe13bdf6761bb297d6e" ,
113+ " fastqc_per_sequence_gc_content_plot_Counts.txt:md5,7108d19c46ef7883e864ba274c457d2e" ,
114+ " fastqc_per_sequence_gc_content_plot_Percentages.txt:md5,23f527c80a148e4f34e5a43f6e520a90" ,
115+ " fastqc_per_sequence_quality_scores_plot.txt:md5,a0cc0e6df7bfb05257da1cfc88b13c50" ,
116+ " fastqc_sequence_counts_plot.txt:md5,c6e4e1588e6765fe8df27812a1322fbd" ,
117+ " fastqc_sequence_duplication_levels_plot.txt:md5,3cde2db4033f6c64648976d1174db925" ,
118+ " fastqc_sequence_length_distribution_plot.txt:md5,e82b9b14a7e24c0c5f27af97cebb6870" ,
119+ " multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f" ,
120+ " multiqc_fastqc.txt:md5,1a41c2158adc9947bff9232962f70110" ,
121+ " multiqc_general_stats.txt:md5,0b54e4e764665bd57fe0f95216744a78"
122+ ]
123+ ],
124+ " meta" : {
125+ " nf-test" : " 0.9.2" ,
126+ " nextflow" : " 25.04.2"
127+ },
128+ " timestamp" : " 2025-06-26T20:06:21.191873263"
129+ }
130+ }
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