feat: update subworkflows from nf-core

Author: atrigila

modules.json

@@ -82,7 +82,7 @@
                     },
                     "propr/propd": {
                         "branch": "master",
-                        "git_sha": "25c228dd132d91596e87b636b0e03fd48d4c951a",
+                        "git_sha": "ce6e8e8bc0c00d284733d7c48ddc794873f60ffe",
                         "installed_by": ["abundance_differential_filter"]
                     },
                     "proteus/readproteingroups": {
@@ -136,22 +136,22 @@
                 "nf-core": {
                     "abundance_differential_filter": {
                         "branch": "master",
-                        "git_sha": "6ac0725bddb061e6f8eb3e22d20129f901021d9a",
+                        "git_sha": "4006954b7bfbbc61c7d5fb009319ed536d2ffca4",
                         "installed_by": ["subworkflows"]
                     },
                     "differential_functional_enrichment": {
                         "branch": "master",
-                        "git_sha": "6ac0725bddb061e6f8eb3e22d20129f901021d9a",
+                        "git_sha": "4006954b7bfbbc61c7d5fb009319ed536d2ffca4",
                         "installed_by": ["subworkflows"]
                     },
                     "utils_nextflow_pipeline": {
                         "branch": "master",
-                        "git_sha": "c2b22d85f30a706a3073387f30380704fcae013b",
+                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                         "installed_by": ["subworkflows"]
                     },
                     "utils_nfcore_pipeline": {
                         "branch": "master",
-                        "git_sha": "51ae5406a030d4da1e49e4dab49756844fdd6c7a",
+                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                         "installed_by": ["subworkflows"]
                     },
                     "utils_nfschema_plugin": {