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CHANGELOG.md

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@@ -7,11 +7,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
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- [[#523](https://github.com/nf-core/differentialabundance/pull/523)] - Add gene_name to differential and abundance tables. ([@antoniasaracco](https://github.com/antoniasaracco), review by [@atrigila](https://github.com/atrigila) and [@grst](https://github.com/grst)).
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- [[#491]](https://github.com/nf-core/differentialabundance/pull/509) - Do not split results table into up- and downregulated. ([@antoniasaracco] (https://github.com/antoniasaracco), review by [@atrigila](https://github.com/atrigila) and [@grst](https://github.com/grst))
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- [[#492](https://github.com/nf-core/differentialabundance/pull/492)] - Fixed volcano plot tooltips by adding column existence check for gene name labels. ([@antoniasaracco] (https://github.com/antoniasaracco), review by [@atrigila](https://github.com/atrigila) and [@grst](https://github.com/grst))
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- [[#478](https://github.com/nf-core/differentialabundance/pull/489)] - Fixed R Markdown report failure with NA values in sample metadata by converting NAs to FALSE in logical operations. ([@antoniasaracco] (https://github.com/antoniasaracco), review by [@atrigila](https://github.com/atrigila) and [@grst](https://github.com/grst))
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- [[#510]](https://github.com/nf-core/differentialabundance/pull/510) - Add decoupler module to differential functional enrichment subworkflow. ([@antoniasaracco](https://github.com/antoniasaracco), review by [@pinin4fjords](https://github.com/pinin4fjords) and [@grst](https://github.com/grst)).
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- [[#523](https://github.com/nf-core/differentialabundance/pull/523)] - Add gene_name to differential and abundance tables. ([@antoniasaracco](https://github.com/antoniasaracco), review by [@pinin4fjords](https://github.com/pinin4fjords) and [@grst](https://github.com/grst)).
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- [[#517](https://github.com/nf-core/differentialabundance/pull/473)] - Expose DREAM options as pipeline params. ([@atrigila](https://github.com/atrigila), review by [@pinin4fjords](https://github.com/pinin4fjords) and [@grst](https://github.com/grst)).
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-[[#510]](https://github.com/nf-core/differentialabundance/pull/510) - Add decoupler module to differential functional enrichment subworkflow. ([@antoniasaracco](https://github.com/antoniasaracco), review by [@pinin4fjords](https://github.com/pinin4fjords) and [@grst](https://github.com/grst)).
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- [[#473](https://github.com/nf-core/differentialabundance/pull/473)] - Allow formula-based contrasts in DESEQ2. ([@atrigila](https://github.com/atrigila), review by [@pinin4fjords](https://github.com/pinin4fjords) and [@grst](https://github.com/grst)).

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