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add organism for testing
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tests/default.nf.test

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@@ -104,6 +104,7 @@ nextflow_pipeline {
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outdir = "$outputDir"
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differential_method = 'deseq2'
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functional_method = 'gprofiler2'
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gprofiler2_organism = 'mmusculus'
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input = 'https://github.com/nf-core/test-datasets/raw/differentialabundance/modules_testdata/variancepartition_dream/metadata.tsv'
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matrix = 'https://github.com/nf-core/test-datasets/raw/differentialabundance/modules_testdata/variancepartition_dream/counts.tsv'
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contrasts_yml = 'https://github.com/nf-core/test-datasets/raw/differentialabundance/testdata/formula_contrasts/rnaseq_complex_contrast.yaml'

tests/test_custom_paramsheet.nf.test

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@@ -90,6 +90,7 @@ nextflow_pipeline {
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outdir = "$outputDir"
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paramsheet = "https://raw.githubusercontent.com/nf-core/test-datasets/refs/heads/differentialabundance/testdata/test_custom_paramsheet.csv"
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paramset_name = "gprofiler2"
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gprofiler2_organism = 'mmusculus'
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// input data
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input = 'https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/genomics/mus_musculus/rnaseq_expression/SRP254919.samplesheet.csv'

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