test from codespaces

Author: SusiJo

tests/default.nf.test

@@ -4,7 +4,7 @@ nextflow_pipeline {
     script "../main.nf"
     tag "test"
     tag "pipeline"
-    profile "+test"
+    profile "test"
 
     test("Test profile - with toolsheet") {
 

tests/default.nf.test.snap

@@ -207,9 +207,9 @@
                 "tables/processed_abundance/all.vst.tsv"
             ],
             [
-                "treatment_mCherry_hND6__SRP254919.dds.rld.rds:md5,dfe51910e230ae9cc2bc9fa5651666ba",
+                "treatment_mCherry_hND6__SRP254919.dds.rld.rds:md5,075109c16a43620545ba483c081fba8d",
                 "treatment_mCherry_hND6__SRP254919.deseq2.sizefactors.tsv:md5,0703c421c53b260f91568dfc0436c054",
-                "treatment_mCherry_hND6_sample_number_SRP254919.dds.rld.rds:md5,54d956233af15c43d48f09bb012a7d7e",
+                "treatment_mCherry_hND6_sample_number_SRP254919.dds.rld.rds:md5,096f7c592e3c5185e4cd5f4caf7f8238",
                 "treatment_mCherry_hND6_sample_number_SRP254919.deseq2.sizefactors.tsv:md5,0703c421c53b260f91568dfc0436c054",
                 "versions.yml:md5,225ced8832439345efa781c726cf2e5c",
                 "versions.yml:md5,d5f6ad8fe6242dcd75bc62b654d1d211",
@@ -239,9 +239,9 @@
         ],
         "meta": {
             "nf-test": "0.9.2",
-            "nextflow": "25.04.3"
+            "nextflow": "25.04.2"
         },
-        "timestamp": "2025-06-16T11:51:37.317965284"
+        "timestamp": "2025-06-16T12:15:18.15923639"
     },
     "Test profile - with toolsheet": {
         "content": [
@@ -451,9 +451,9 @@
                 "tables/processed_abundance/all.vst.tsv"
             ],
             [
-                "treatment_mCherry_hND6__SRP254919.dds.rld.rds:md5,dfe51910e230ae9cc2bc9fa5651666ba",
+                "treatment_mCherry_hND6__SRP254919.dds.rld.rds:md5,075109c16a43620545ba483c081fba8d",
                 "treatment_mCherry_hND6__SRP254919.deseq2.sizefactors.tsv:md5,0703c421c53b260f91568dfc0436c054",
-                "treatment_mCherry_hND6_sample_number_SRP254919.dds.rld.rds:md5,54d956233af15c43d48f09bb012a7d7e",
+                "treatment_mCherry_hND6_sample_number_SRP254919.dds.rld.rds:md5,096f7c592e3c5185e4cd5f4caf7f8238",
                 "treatment_mCherry_hND6_sample_number_SRP254919.deseq2.sizefactors.tsv:md5,0703c421c53b260f91568dfc0436c054",
                 "versions.yml:md5,225ced8832439345efa781c726cf2e5c",
                 "versions.yml:md5,d5f6ad8fe6242dcd75bc62b654d1d211",
@@ -483,9 +483,9 @@
         ],
         "meta": {
             "nf-test": "0.9.2",
-            "nextflow": "25.04.3"
+            "nextflow": "25.04.2"
         },
-        "timestamp": "2025-06-16T13:03:58.647930479"
+        "timestamp": "2025-06-16T12:11:01.058781423"
     },
     "Test profile - yml no formula": {
         "content": [
@@ -695,9 +695,9 @@
                 "tables/processed_abundance/all.vst.tsv"
             ],
             [
-                "treatment_mCherry_hND6__SRP254919.dds.rld.rds:md5,dfe51910e230ae9cc2bc9fa5651666ba",
+                "treatment_mCherry_hND6__SRP254919.dds.rld.rds:md5,075109c16a43620545ba483c081fba8d",
                 "treatment_mCherry_hND6__SRP254919.deseq2.sizefactors.tsv:md5,0703c421c53b260f91568dfc0436c054",
-                "treatment_mCherry_hND6_sample_number_SRP254919.dds.rld.rds:md5,54d956233af15c43d48f09bb012a7d7e",
+                "treatment_mCherry_hND6_sample_number_SRP254919.dds.rld.rds:md5,096f7c592e3c5185e4cd5f4caf7f8238",
                 "treatment_mCherry_hND6_sample_number_SRP254919.deseq2.sizefactors.tsv:md5,0703c421c53b260f91568dfc0436c054",
                 "versions.yml:md5,225ced8832439345efa781c726cf2e5c",
                 "versions.yml:md5,d5f6ad8fe6242dcd75bc62b654d1d211",
@@ -727,8 +727,8 @@
         ],
         "meta": {
             "nf-test": "0.9.2",
-            "nextflow": "25.04.3"
+            "nextflow": "25.04.2"
         },
-        "timestamp": "2025-06-16T11:52:57.469365624"
+        "timestamp": "2025-06-16T12:19:34.669207711"
     }
 }