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chore: remove old unused section
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workflows/differentialabundance.nf

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@@ -686,19 +686,6 @@ workflow DIFFERENTIALABUNDANCE {
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// and it is needed for "checkListIsSubset()" in `SHINYNGS` make_app_from_files.R
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// for backwards-compatibility, keep only the channels that have non-empty variable
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// Filter by those channels containing 'variable', regroup
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ch_contrasts_filtered = ch_contrasts
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.transpose()
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.filter { meta, contrast, variable, reference, target, formula, comparison ->
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variable?.trim()
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}
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.groupTuple()
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ch_differential_results_with_variable = ch_differential_results
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.filter { meta, contrast, results ->
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contrast.variable?.trim()
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}
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// Create a channel with the differential results and the corresponding map with
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// the contrast entries
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differential_with_contrast = ch_paramsets

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